Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 POU5F1P2-201ENST00000521750 823 ntBASIC16.45■□□□□ 0.22
CHMP4BP1P59074 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 AC008825.2-201ENST00000603374 718 ntBASIC16.45■□□□□ 0.22
CHMP4BP1P59074 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 AC126335.2-201ENST00000623362 4637 ntBASIC16.44■□□□□ 0.22
CHMP4BP1P59074 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 AC008267.1-201ENST00000474858 1069 ntBASIC16.44■□□□□ 0.22
CHMP4BP1P59074 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 AC242376.1-201ENST00000559033 726 ntBASIC16.44■□□□□ 0.22
CHMP4BP1P59074 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 AL109837.1-201ENST00000603272 613 ntBASIC16.44■□□□□ 0.22
CHMP4BP1P59074 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 C8orf49-201ENST00000525043 1968 ntBASIC16.44■□□□□ 0.22
CHMP4BP1P59074 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP4BP1P59074 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 MST1P2-201ENST00000457982 2291 ntBASIC16.43■□□□□ 0.22
CHMP4BP1P59074 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 CAP2P1-201ENST00000557743 1390 ntBASIC16.43■□□□□ 0.22
CHMP4BP1P59074 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 OR2K2-202ENST00000374428 1038 ntBASIC16.43■□□□□ 0.22
CHMP4BP1P59074 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 TLE1P1-201ENST00000422965 589 ntBASIC16.43■□□□□ 0.22
CHMP4BP1P59074 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.43■□□□□ 0.22
CHMP4BP1P59074 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms