Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 DPM3-202ENST00000368399 517 ntBASIC13.18□□□□□ -0.3
CLDN20P56880 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN20P56880 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN20P56880 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN20P56880 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN20P56880 AC091804.1-201ENST00000486888 567 ntBASIC13.18□□□□□ -0.3
CLDN20P56880 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN20P56880 AC005740.2-201ENST00000511085 419 ntBASIC13.18□□□□□ -0.3
CLDN20P56880 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN20P56880 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN20P56880 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CLDN20P56880 AL160314.3-201ENST00000556041 767 ntBASIC13.18□□□□□ -0.3
CLDN20P56880 RN7SL163P-201ENST00000583100 276 ntBASIC13.18□□□□□ -0.3
CLDN20P56880 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN20P56880 AC008805.1-201ENST00000590892 364 ntBASIC13.18□□□□□ -0.3
CLDN20P56880 AC009884.2-201ENST00000603110 324 ntBASIC13.18□□□□□ -0.3
CLDN20P56880 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN20P56880 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CLDN20P56880 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN20P56880 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN20P56880 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN20P56880 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CLDN20P56880 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CLDN20P56880 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN20P56880 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 TMBIM7P-202ENST00000641474 1516 ntBASIC13.18□□□□□ -0.3
CLDN20P56880 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN20P56880 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN20P56880 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN20P56880 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
CLDN20P56880 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN20P56880 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN20P56880 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN20P56880 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.17□□□□□ -0.3
CLDN20P56880 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLDN20P56880 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CLDN20P56880 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CLDN20P56880 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 AC009093.10-201ENST00000641956 1442 ntBASIC13.17□□□□□ -0.3
CLDN20P56880 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CLDN20P56880 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLDN20P56880 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN20P56880 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLDN20P56880 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.17□□□□□ -0.3
CLDN20P56880 AC022447.6-201ENST00000515522 438 ntBASIC13.17□□□□□ -0.3
CLDN20P56880 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 AC068587.8-201ENST00000641239 219 ntBASIC13.17□□□□□ -0.3
CLDN20P56880 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN20P56880 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CLDN20P56880 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN20P56880 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLDN20P56880 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN20P56880 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
CLDN20P56880 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN20P56880 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLDN20P56880 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN20P56880 AC023794.5-201ENST00000564380 2157 ntBASIC13.17□□□□□ -0.3
CLDN20P56880 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN20P56880 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN20P56880 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN20P56880 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CLDN20P56880 MYADML-201ENST00000474610 2147 ntBASIC13.16□□□□□ -0.3
CLDN20P56880 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.16□□□□□ -0.3
CLDN20P56880 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN20P56880 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN20P56880 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms