Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2DP55273 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2DP55273 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKN2DP55273 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDKN2DP55273 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDKN2DP55273 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CDKN2DP55273 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.11□□□□□ -0.15
CDKN2DP55273 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.11□□□□□ -0.15
CDKN2DP55273 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.11□□□□□ -0.15
CDKN2DP55273 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 AC020658.7-201ENST00000624274 2442 ntBASIC14.11□□□□□ -0.15
CDKN2DP55273 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDKN2DP55273 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDKN2DP55273 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 BTBD6P1-201ENST00000412176 1267 ntBASIC14.11□□□□□ -0.15
CDKN2DP55273 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.11□□□□□ -0.15
CDKN2DP55273 KRT18P8-201ENST00000581937 1246 ntBASIC14.11□□□□□ -0.15
CDKN2DP55273 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.11□□□□□ -0.15
CDKN2DP55273 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.11□□□□□ -0.15
CDKN2DP55273 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.11□□□□□ -0.15
CDKN2DP55273 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 SHMT1P1-201ENST00000419974 1312 ntBASIC14.11□□□□□ -0.15
CDKN2DP55273 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.11□□□□□ -0.15
CDKN2DP55273 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 AC005252.3-201ENST00000623855 2258 ntBASIC14.11□□□□□ -0.15
CDKN2DP55273 AC135782.3-201ENST00000562782 2105 ntBASIC14.11□□□□□ -0.15
CDKN2DP55273 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2DP55273 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDKN2DP55273 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDKN2DP55273 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CDKN2DP55273 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKN2DP55273 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.1□□□□□ -0.15
CDKN2DP55273 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
CDKN2DP55273 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
CDKN2DP55273 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CDKN2DP55273 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.1□□□□□ -0.15
CDKN2DP55273 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CDKN2DP55273 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CDKN2DP55273 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKN2DP55273 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.1□□□□□ -0.15
CDKN2DP55273 AC104073.2-201ENST00000453737 312 ntBASIC14.1□□□□□ -0.15
CDKN2DP55273 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.1□□□□□ -0.15
CDKN2DP55273 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.1□□□□□ -0.15
CDKN2DP55273 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.1□□□□□ -0.15
CDKN2DP55273 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKN2DP55273 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.1□□□□□ -0.15
CDKN2DP55273 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 AL023803.2-201ENST00000620080 638 ntBASIC14.1□□□□□ -0.15
CDKN2DP55273 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKN2DP55273 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms