Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.58□□□□□ -0.24
CLK1P49759 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.58□□□□□ -0.24
CLK1P49759 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.58□□□□□ -0.24
CLK1P49759 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CLK1P49759 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.58□□□□□ -0.24
CLK1P49759 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.58□□□□□ -0.24
CLK1P49759 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.58□□□□□ -0.24
CLK1P49759 GAPDHP21-201ENST00000450301 1010 ntBASIC13.58□□□□□ -0.24
CLK1P49759 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.58□□□□□ -0.24
CLK1P49759 AC026434.2-201ENST00000506094 1078 ntBASIC13.58□□□□□ -0.24
CLK1P49759 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CLK1P49759 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.58□□□□□ -0.24
CLK1P49759 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.58□□□□□ -0.24
CLK1P49759 AC106886.1-201ENST00000568660 600 ntBASIC13.58□□□□□ -0.24
CLK1P49759 AC025279.2-201ENST00000569730 653 ntBASIC13.58□□□□□ -0.24
CLK1P49759 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.58□□□□□ -0.24
CLK1P49759 AC132938.2-201ENST00000579188 680 ntBASIC13.58□□□□□ -0.24
CLK1P49759 AC008735.3-201ENST00000596646 500 ntBASIC13.58□□□□□ -0.24
CLK1P49759 ENPP7P14-201ENST00000621765 1040 ntBASIC13.58□□□□□ -0.24
CLK1P49759 AL591163.1-201ENST00000641757 987 ntBASIC13.58□□□□□ -0.24
CLK1P49759 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CLK1P49759 AL138709.1-201ENST00000614840 1693 ntBASIC13.58□□□□□ -0.24
CLK1P49759 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CLK1P49759 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 AGGF1P1-201ENST00000509500 2073 ntBASIC13.58□□□□□ -0.24
CLK1P49759 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CLK1P49759 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.58□□□□□ -0.24
CLK1P49759 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
CLK1P49759 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CLK1P49759 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CLK1P49759 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.58□□□□□ -0.24
CLK1P49759 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.58□□□□□ -0.24
CLK1P49759 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.58□□□□□ -0.24
CLK1P49759 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
CLK1P49759 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.58□□□□□ -0.24
CLK1P49759 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLK1P49759 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CLK1P49759 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.57□□□□□ -0.24
CLK1P49759 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLK1P49759 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.57□□□□□ -0.24
CLK1P49759 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.57□□□□□ -0.24
CLK1P49759 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.57□□□□□ -0.24
CLK1P49759 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 AC092933.1-201ENST00000393644 945 ntBASIC13.57□□□□□ -0.24
CLK1P49759 CD8B2-202ENST00000417670 633 ntBASIC13.57□□□□□ -0.24
CLK1P49759 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.57□□□□□ -0.24
CLK1P49759 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.57□□□□□ -0.24
CLK1P49759 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.57□□□□□ -0.24
CLK1P49759 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CLK1P49759 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.57□□□□□ -0.24
CLK1P49759 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.57□□□□□ -0.24
CLK1P49759 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.57□□□□□ -0.24
CLK1P49759 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CLK1P49759 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.57□□□□□ -0.24
CLK1P49759 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CLK1P49759 IGHV3-72-202ENST00000621503 303 ntBASIC13.57□□□□□ -0.24
CLK1P49759 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.57□□□□□ -0.24
CLK1P49759 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 AL365181.3-201ENST00000605886 3222 ntBASIC13.57□□□□□ -0.24
CLK1P49759 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CLK1P49759 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.57□□□□□ -0.24
CLK1P49759 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.57□□□□□ -0.24
CLK1P49759 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms