Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 EIF2S1-201ENST00000256383 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 CES5A-206ENST00000521992 2258 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
PCP4P48539 MYHAS-201ENST00000587182 2274 ntTSL 5 BASIC9.2□□□□□ -0.94
PCP4P48539 CRISPLD2-201ENST00000262424 4586 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 AC019322.4-201ENST00000623470 3930 ntBASIC9.2□□□□□ -0.94
PCP4P48539 CCDC144B-208ENST00000618081 8688 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 EARS2-201ENST00000449606 3961 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 ARL1-201ENST00000261636 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 THAP5-203ENST00000415914 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 TAF2-201ENST00000378164 5048 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PCP4P48539 GLB1L3-203ENST00000431683 2583 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
PCP4P48539 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 HMOX2-203ENST00000406590 1727 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
PCP4P48539 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 APOBEC3F-201ENST00000308521 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 BRD7-201ENST00000394688 5370 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 DLG3-210ENST00000542398 4529 ntTSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 MC1R-203ENST00000555427 3637 ntTSL 5 BASIC9.19□□□□□ -0.94
PCP4P48539 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 CD300LG-202ENST00000317310 2758 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 AL118508.3-201ENST00000623468 1854 ntBASIC9.19□□□□□ -0.94
PCP4P48539 JDP2-204ENST00000437176 3775 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
PCP4P48539 LRRC46-201ENST00000269025 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 AC025283.2-203ENST00000618352 2905 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
PCP4P48539 ITGA11-201ENST00000315757 3955 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 PUDP-201ENST00000381077 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 PRSS51-204ENST00000637190 2149 ntTSL 5 BASIC9.19□□□□□ -0.94
PCP4P48539 ZNF135-203ENST00000401053 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 LINC01484-203ENST00000521128 2361 ntTSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 CASP7-212ENST00000621607 2378 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 RIPOR2-202ENST00000378023 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 MYO1C-204ENST00000545534 3676 ntTSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 SPIN2A-202ENST00000374908 2468 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
PCP4P48539 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 RPS14P4-201ENST00000415880 418 ntBASIC9.19□□□□□ -0.94
PCP4P48539 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
PCP4P48539 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC9.19□□□□□ -0.94
PCP4P48539 ZNF792-202ENST00000605484 2567 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 AC004947.2-201ENST00000623092 2671 ntBASIC9.19□□□□□ -0.94
PCP4P48539 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 ZSCAN2-204ENST00000358472 3231 ntTSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
PCP4P48539 EFCAB6-201ENST00000262726 4869 ntAPPRIS P4 TSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 STYX-201ENST00000354586 4857 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 RAP1GAP-212ENST00000542643 3426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 TMEM174-201ENST00000296776 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
PCP4P48539 KDM2A-212ENST00000530342 3651 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
PCP4P48539 HSPA5-201ENST00000324460 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 GSPT1-206ENST00000563468 1962 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 NAP1L6-201ENST00000373518 2044 ntBASIC9.19□□□□□ -0.94
PCP4P48539 TEF-202ENST00000406644 4386 ntTSL 2 BASIC9.19□□□□□ -0.94
PCP4P48539 AL133355.1-201ENST00000568017 2388 ntBASIC9.19□□□□□ -0.94
PCP4P48539 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PCP4P48539 GRAMD1B-201ENST00000322282 2571 ntTSL 5 BASIC9.18□□□□□ -0.94
PCP4P48539 EPB41L2-208ENST00000524581 3090 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
PCP4P48539 MROH5-201ENST00000430863 4164 ntAPPRIS P5 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 BEND3-202ENST00000429433 6654 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 CHML-201ENST00000366553 7594 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
PCP4P48539 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 PLA2G4D-201ENST00000290472 3584 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 KANK4-203ENST00000371150 3023 ntTSL 2 BASIC9.18□□□□□ -0.94
PCP4P48539 NFYC-203ENST00000372652 2363 ntTSL 2 BASIC9.18□□□□□ -0.94
PCP4P48539 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
PCP4P48539 PRAMENP-202ENST00000419303 1869 ntTSL 2 BASIC9.18□□□□□ -0.94
PCP4P48539 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms