Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP13P45452 AC087386.2-201ENST00000623212 4637 ntBASIC14.92□□□□□ -0.02
MMP13P45452 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.92□□□□□ -0.02
MMP13P45452 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.92□□□□□ -0.02
MMP13P45452 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 AL365181.3-201ENST00000605886 3222 ntBASIC14.92□□□□□ -0.02
MMP13P45452 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
MMP13P45452 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MMP13P45452 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 TUBB1P2-201ENST00000422712 1306 ntBASIC14.92□□□□□ -0.02
MMP13P45452 TUBB1P1-201ENST00000503144 1300 ntBASIC14.92□□□□□ -0.02
MMP13P45452 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.91□□□□□ -0.02
MMP13P45452 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.91□□□□□ -0.02
MMP13P45452 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.91□□□□□ -0.02
MMP13P45452 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 AC244394.1-201ENST00000435000 1665 ntBASIC14.91□□□□□ -0.02
MMP13P45452 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.91□□□□□ -0.02
MMP13P45452 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.91□□□□□ -0.02
MMP13P45452 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.91□□□□□ -0.02
MMP13P45452 GOLGA2P4-201ENST00000441462 777 ntBASIC14.91□□□□□ -0.02
MMP13P45452 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.91□□□□□ -0.02
MMP13P45452 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.91□□□□□ -0.02
MMP13P45452 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
MMP13P45452 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.91□□□□□ -0.02
MMP13P45452 MIR6720-201ENST00000611664 98 ntBASIC14.91□□□□□ -0.02
MMP13P45452 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.91□□□□□ -0.02
MMP13P45452 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
MMP13P45452 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
MMP13P45452 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
MMP13P45452 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
MMP13P45452 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
MMP13P45452 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
MMP13P45452 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP13P45452 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
MMP13P45452 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.9□□□□□ -0.02
MMP13P45452 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.9□□□□□ -0.02
MMP13P45452 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.9□□□□□ -0.02
MMP13P45452 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP13P45452 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP13P45452 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.9□□□□□ -0.02
MMP13P45452 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.9□□□□□ -0.02
MMP13P45452 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.9□□□□□ -0.02
MMP13P45452 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.9□□□□□ -0.02
MMP13P45452 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP13P45452 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.9□□□□□ -0.02
MMP13P45452 AL162426.1-201ENST00000624141 743 ntBASIC14.9□□□□□ -0.02
MMP13P45452 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
MMP13P45452 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
MMP13P45452 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms