Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC18.8■□□□□ 0.6
USP6P35125 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
USP6P35125 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
USP6P35125 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 SNU13-204ENST00000402458 462 ntTSL 3 BASIC18.8■□□□□ 0.6
USP6P35125 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC18.8■□□□□ 0.6
USP6P35125 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
USP6P35125 BCRP4-201ENST00000506079 804 ntBASIC18.8■□□□□ 0.6
USP6P35125 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC18.8■□□□□ 0.6
USP6P35125 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC18.8■□□□□ 0.6
USP6P35125 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC18.8■□□□□ 0.6
USP6P35125 AC132812.1-201ENST00000583145 892 ntBASIC18.8■□□□□ 0.6
USP6P35125 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6P35125 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.79■□□□□ 0.6
USP6P35125 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC18.79■□□□□ 0.6
USP6P35125 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
USP6P35125 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
USP6P35125 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC18.79■□□□□ 0.6
USP6P35125 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
USP6P35125 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC18.79■□□□□ 0.6
USP6P35125 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC18.79■□□□□ 0.6
USP6P35125 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC18.79■□□□□ 0.6
USP6P35125 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC18.79■□□□□ 0.6
USP6P35125 KF455155.1-201ENST00000604493 303 ntBASIC18.79■□□□□ 0.6
USP6P35125 CSTP2-201ENST00000610599 398 ntBASIC18.79■□□□□ 0.6
USP6P35125 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
USP6P35125 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC18.79■□□□□ 0.6
USP6P35125 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC18.79■□□□□ 0.6
USP6P35125 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
USP6P35125 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC18.79■□□□□ 0.6
USP6P35125 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6P35125 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP6P35125 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC18.78■□□□□ 0.6
USP6P35125 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USP6P35125 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6P35125 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6P35125 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USP6P35125 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6P35125 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6P35125 AL357373.1-201ENST00000394974 322 ntBASIC18.78■□□□□ 0.6
USP6P35125 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC18.78■□□□□ 0.6
USP6P35125 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC18.78■□□□□ 0.6
USP6P35125 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC18.78■□□□□ 0.6
USP6P35125 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC18.78■□□□□ 0.6
USP6P35125 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC18.78■□□□□ 0.6
USP6P35125 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.78■□□□□ 0.6
USP6P35125 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6P35125 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6P35125 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP6P35125 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6P35125 AC061965.1-201ENST00000560524 1465 ntBASIC18.78■□□□□ 0.6
USP6P35125 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC18.78■□□□□ 0.6
USP6P35125 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
USP6P35125 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP6P35125 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.78■□□□□ 0.6
USP6P35125 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6P35125 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USP6P35125 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC18.77■□□□□ 0.6
USP6P35125 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
USP6P35125 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6P35125 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC18.77■□□□□ 0.6
USP6P35125 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
USP6P35125 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
USP6P35125 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6P35125 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6P35125 HNRNPA1P58-201ENST00000403629 610 ntBASIC18.77■□□□□ 0.6
USP6P35125 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USP6P35125 CDCA4P4-201ENST00000435216 680 ntBASIC18.77■□□□□ 0.6
USP6P35125 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC18.77■□□□□ 0.6
USP6P35125 AC133141.1-201ENST00000443015 339 ntBASIC18.77■□□□□ 0.6
USP6P35125 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.77■□□□□ 0.6
USP6P35125 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC18.77■□□□□ 0.6
USP6P35125 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC18.77■□□□□ 0.6
USP6P35125 ANKRD26P1-203ENST00000569528 966 ntBASIC18.77■□□□□ 0.6
USP6P35125 MIR3940-201ENST00000579148 102 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms