Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCANP13611 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
VCANP13611 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC14.29□□□□□ -0.12
VCANP13611 AC073465.1-201ENST00000456671 464 ntBASIC14.29□□□□□ -0.12
VCANP13611 SSR3-202ENST00000463503 596 ntTSL 4 BASIC14.29□□□□□ -0.12
VCANP13611 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC14.29□□□□□ -0.12
VCANP13611 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VCANP13611 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VCANP13611 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VCANP13611 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VCANP13611 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCANP13611 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCANP13611 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VCANP13611 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.28□□□□□ -0.12
VCANP13611 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VCANP13611 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.28□□□□□ -0.12
VCANP13611 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.28□□□□□ -0.12
VCANP13611 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VCANP13611 OR7E155P-201ENST00000412208 1014 ntBASIC14.28□□□□□ -0.12
VCANP13611 AL121994.1-201ENST00000413189 402 ntBASIC14.28□□□□□ -0.12
VCANP13611 AC020893.2-201ENST00000506083 723 ntBASIC14.28□□□□□ -0.12
VCANP13611 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC14.28□□□□□ -0.12
VCANP13611 AL078624.1-201ENST00000604004 547 ntBASIC14.28□□□□□ -0.12
VCANP13611 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC14.28□□□□□ -0.12
VCANP13611 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VCANP13611 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VCANP13611 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VCANP13611 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VCANP13611 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCANP13611 AC008620.2-201ENST00000510294 1569 ntBASIC14.28□□□□□ -0.12
VCANP13611 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VCANP13611 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCANP13611 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCANP13611 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VCANP13611 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCANP13611 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.28□□□□□ -0.12
VCANP13611 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC14.28□□□□□ -0.12
VCANP13611 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC14.28□□□□□ -0.12
VCANP13611 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCANP13611 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.28□□□□□ -0.12
VCANP13611 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.28□□□□□ -0.12
VCANP13611 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC14.28□□□□□ -0.12
VCANP13611 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VCANP13611 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.28□□□□□ -0.12
VCANP13611 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC14.28□□□□□ -0.12
VCANP13611 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VCANP13611 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.28□□□□□ -0.12
VCANP13611 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.28□□□□□ -0.12
VCANP13611 EEF1DP2-201ENST00000433698 843 ntBASIC14.28□□□□□ -0.12
VCANP13611 FTH1-205ENST00000529631 507 ntTSL 4 BASIC14.28□□□□□ -0.12
VCANP13611 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC14.28□□□□□ -0.12
VCANP13611 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC14.28□□□□□ -0.12
VCANP13611 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VCANP13611 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC14.28□□□□□ -0.12
VCANP13611 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC14.28□□□□□ -0.12
VCANP13611 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCANP13611 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCANP13611 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
VCANP13611 AL139424.2-202ENST00000641335 1369 ntBASIC14.27□□□□□ -0.12
VCANP13611 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCANP13611 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCANP13611 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCANP13611 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VCANP13611 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCANP13611 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VCANP13611 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
VCANP13611 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCANP13611 AP001331.1-201ENST00000413008 1015 ntBASIC14.27□□□□□ -0.12
VCANP13611 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.27□□□□□ -0.12
VCANP13611 IGHV3OR16-11-201ENST00000565524 349 ntBASIC14.27□□□□□ -0.12
VCANP13611 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC14.27□□□□□ -0.12
VCANP13611 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC14.27□□□□□ -0.12
VCANP13611 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.27□□□□□ -0.12
VCANP13611 AC064801.2-201ENST00000625052 1303 ntBASIC14.27□□□□□ -0.12
VCANP13611 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
VCANP13611 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
VCANP13611 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VCANP13611 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCANP13611 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCANP13611 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC14.27□□□□□ -0.13
VCANP13611 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC14.27□□□□□ -0.13
VCANP13611 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VCANP13611 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC14.27□□□□□ -0.13
VCANP13611 RN7SL624P-201ENST00000580297 278 ntBASIC14.27□□□□□ -0.13
VCANP13611 AC007274.3-201ENST00000619838 385 ntBASIC14.27□□□□□ -0.13
VCANP13611 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.27□□□□□ -0.13
VCANP13611 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCANP13611 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VCANP13611 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VCANP13611 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCANP13611 PPT1-215ENST00000641471 2368 ntBASIC14.27□□□□□ -0.13
VCANP13611 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.27□□□□□ -0.13
VCANP13611 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VCANP13611 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VCANP13611 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
VCANP13611 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCANP13611 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.27□□□□□ -0.13
VCANP13611 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VCANP13611 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCANP13611 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms