Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.04□□□□□ -0.16
PCNAP12004 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
PCNAP12004 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 AC079776.1-201ENST00000401540 1152 ntBASIC14.04□□□□□ -0.16
PCNAP12004 AC010141.1-201ENST00000411585 623 ntBASIC14.04□□□□□ -0.16
PCNAP12004 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.04□□□□□ -0.16
PCNAP12004 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 ACA64.2-201ENST00000459014 129 ntBASIC14.04□□□□□ -0.16
PCNAP12004 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.04□□□□□ -0.16
PCNAP12004 HILS1-202ENST00000545329 423 ntBASIC14.04□□□□□ -0.16
PCNAP12004 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.04□□□□□ -0.16
PCNAP12004 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.04□□□□□ -0.16
PCNAP12004 MIR4741-201ENST00000579822 90 ntBASIC14.04□□□□□ -0.16
PCNAP12004 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PCNAP12004 MIR6775-201ENST00000617557 69 ntBASIC14.04□□□□□ -0.16
PCNAP12004 AC008687.7-202ENST00000637404 953 ntBASIC14.04□□□□□ -0.16
PCNAP12004 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.04□□□□□ -0.16
PCNAP12004 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
PCNAP12004 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.04□□□□□ -0.16
PCNAP12004 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.04□□□□□ -0.16
PCNAP12004 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PCNAP12004 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.04□□□□□ -0.16
PCNAP12004 MIR497HG-202ENST00000572453 3838 ntBASIC14.04□□□□□ -0.16
PCNAP12004 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
PCNAP12004 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.04□□□□□ -0.16
PCNAP12004 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PCNAP12004 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCNAP12004 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.03□□□□□ -0.16
PCNAP12004 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PCNAP12004 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.03□□□□□ -0.16
PCNAP12004 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.03□□□□□ -0.16
PCNAP12004 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.03□□□□□ -0.16
PCNAP12004 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.03□□□□□ -0.16
PCNAP12004 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PCNAP12004 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PCNAP12004 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.03□□□□□ -0.16
PCNAP12004 HLA-V-201ENST00000429037 534 ntBASIC14.03□□□□□ -0.16
PCNAP12004 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.03□□□□□ -0.16
PCNAP12004 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.03□□□□□ -0.16
PCNAP12004 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.03□□□□□ -0.16
PCNAP12004 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.03□□□□□ -0.16
PCNAP12004 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.03□□□□□ -0.16
PCNAP12004 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.03□□□□□ -0.16
PCNAP12004 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.03□□□□□ -0.16
PCNAP12004 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PCNAP12004 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.03□□□□□ -0.16
PCNAP12004 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.03□□□□□ -0.16
PCNAP12004 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.03□□□□□ -0.16
PCNAP12004 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 TCAM1P-207ENST00000485295 1537 ntBASIC14.03□□□□□ -0.16
PCNAP12004 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.03□□□□□ -0.16
PCNAP12004 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.03□□□□□ -0.16
PCNAP12004 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 AL023775.1-201ENST00000454907 1746 ntBASIC14.03□□□□□ -0.16
PCNAP12004 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PCNAP12004 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.03□□□□□ -0.16
PCNAP12004 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.03□□□□□ -0.16
PCNAP12004 FAM90A12P-201ENST00000519497 2375 ntBASIC14.03□□□□□ -0.16
PCNAP12004 FAM90A24P-201ENST00000520792 2369 ntBASIC14.03□□□□□ -0.16
PCNAP12004 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PCNAP12004 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCNAP12004 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.03□□□□□ -0.16
PCNAP12004 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.02□□□□□ -0.16
PCNAP12004 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCNAP12004 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCNAP12004 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
PCNAP12004 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
PCNAP12004 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.02□□□□□ -0.16
PCNAP12004 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCNAP12004 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms