Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 AC079112.1-201ENST00000454972 939 ntBASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 MYADML-201ENST00000474610 2147 ntBASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 ORAOV1P1-201ENST00000503108 395 ntBASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 AC135983.4-201ENST00000564116 1262 ntBASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 AC007881.3-201ENST00000608897 607 ntBASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 MIR6842-201ENST00000612539 65 ntBASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 AC117489.1-201ENST00000625169 3217 ntBASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 AC073869.2-201ENST00000417338 1026 ntBASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 AL161932.2-201ENST00000435436 679 ntBASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 AP001184.1-201ENST00000637936 376 ntBASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms