Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FREM3P0C091 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FREM3P0C091 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FREM3P0C091 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
FREM3P0C091 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.97□□□□□ -0.33
FREM3P0C091 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.97□□□□□ -0.33
FREM3P0C091 AC079781.5-202ENST00000641784 3743 ntBASIC12.97□□□□□ -0.33
FREM3P0C091 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.97□□□□□ -0.33
FREM3P0C091 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FREM3P0C091 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FREM3P0C091 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FREM3P0C091 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.97□□□□□ -0.33
FREM3P0C091 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
FREM3P0C091 KRT17P5-201ENST00000332088 839 ntBASIC12.97□□□□□ -0.33
FREM3P0C091 AC026316.1-201ENST00000398900 414 ntBASIC12.97□□□□□ -0.33
FREM3P0C091 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
FREM3P0C091 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.97□□□□□ -0.33
FREM3P0C091 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.97□□□□□ -0.33
FREM3P0C091 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.97□□□□□ -0.33
FREM3P0C091 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FREM3P0C091 AC005740.1-201ENST00000515639 522 ntBASIC12.97□□□□□ -0.33
FREM3P0C091 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
FREM3P0C091 RN7SL665P-201ENST00000578793 300 ntBASIC12.97□□□□□ -0.33
FREM3P0C091 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.97□□□□□ -0.33
FREM3P0C091 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FREM3P0C091 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
FREM3P0C091 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
FREM3P0C091 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
FREM3P0C091 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.96□□□□□ -0.33
FREM3P0C091 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 FAM90A2P-201ENST00000511144 1395 ntBASIC12.96□□□□□ -0.33
FREM3P0C091 FAM90A25P-201ENST00000528404 1395 ntBASIC12.96□□□□□ -0.33
FREM3P0C091 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.96□□□□□ -0.33
FREM3P0C091 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.96□□□□□ -0.33
FREM3P0C091 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.96□□□□□ -0.33
FREM3P0C091 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
FREM3P0C091 AL512430.1-201ENST00000392575 860 ntBASIC12.96□□□□□ -0.33
FREM3P0C091 BANF1P3-201ENST00000412556 261 ntBASIC12.96□□□□□ -0.33
FREM3P0C091 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.96□□□□□ -0.33
FREM3P0C091 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.96□□□□□ -0.33
FREM3P0C091 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 AL807761.2-201ENST00000422849 729 ntBASIC12.96□□□□□ -0.33
FREM3P0C091 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.96□□□□□ -0.33
FREM3P0C091 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.96□□□□□ -0.33
FREM3P0C091 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.96□□□□□ -0.33
FREM3P0C091 MAGEA5-201ENST00000446757 942 ntBASIC12.96□□□□□ -0.33
FREM3P0C091 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.96□□□□□ -0.33
FREM3P0C091 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.96□□□□□ -0.33
FREM3P0C091 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.96□□□□□ -0.33
FREM3P0C091 AC005586.2-201ENST00000563946 837 ntBASIC12.96□□□□□ -0.33
FREM3P0C091 MIR6769A-201ENST00000617340 73 ntBASIC12.96□□□□□ -0.33
FREM3P0C091 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.96□□□□□ -0.33
FREM3P0C091 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
FREM3P0C091 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FREM3P0C091 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.96□□□□□ -0.33
FREM3P0C091 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.96□□□□□ -0.34
FREM3P0C091 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FREM3P0C091 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FREM3P0C091 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FREM3P0C091 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FREM3P0C091 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
FREM3P0C091 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FREM3P0C091 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
FREM3P0C091 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
FREM3P0C091 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
FREM3P0C091 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.96□□□□□ -0.34
FREM3P0C091 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FREM3P0C091 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
FREM3P0C091 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
FREM3P0C091 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 AC006987.1-201ENST00000413610 527 ntBASIC12.95□□□□□ -0.34
FREM3P0C091 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.95□□□□□ -0.34
FREM3P0C091 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.95□□□□□ -0.34
FREM3P0C091 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.95□□□□□ -0.34
FREM3P0C091 AC009145.4-201ENST00000625119 1294 ntBASIC12.95□□□□□ -0.34
FREM3P0C091 LINC01815-202ENST00000641468 1409 ntBASIC12.95□□□□□ -0.34
FREM3P0C091 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
FREM3P0C091 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.95□□□□□ -0.34
FREM3P0C091 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.95□□□□□ -0.34
FREM3P0C091 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.95□□□□□ -0.34
FREM3P0C091 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms