Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC1P02654 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.77□□□□□ -0.37
APOC1P02654 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC1P02654 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC1P02654 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.77□□□□□ -0.37
APOC1P02654 CNN2P8-201ENST00000421872 913 ntBASIC12.77□□□□□ -0.37
APOC1P02654 AL355994.2-201ENST00000447882 704 ntBASIC12.77□□□□□ -0.37
APOC1P02654 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.77□□□□□ -0.37
APOC1P02654 USP32P1-208ENST00000506594 1164 ntBASIC12.77□□□□□ -0.37
APOC1P02654 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.77□□□□□ -0.37
APOC1P02654 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.77□□□□□ -0.37
APOC1P02654 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.77□□□□□ -0.37
APOC1P02654 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.77□□□□□ -0.37
APOC1P02654 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.77□□□□□ -0.37
APOC1P02654 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
APOC1P02654 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.77□□□□□ -0.37
APOC1P02654 AC138951.2-201ENST00000623455 1161 ntBASIC12.77□□□□□ -0.37
APOC1P02654 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC1P02654 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.77□□□□□ -0.37
APOC1P02654 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
APOC1P02654 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 TUBB8P4-201ENST00000511806 1324 ntBASIC12.77□□□□□ -0.37
APOC1P02654 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC1P02654 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
APOC1P02654 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 KRT8P28-201ENST00000433288 1390 ntBASIC12.77□□□□□ -0.37
APOC1P02654 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC1P02654 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
APOC1P02654 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC1P02654 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.77□□□□□ -0.37
APOC1P02654 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC1P02654 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
APOC1P02654 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC1P02654 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.77□□□□□ -0.37
APOC1P02654 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
APOC1P02654 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.77□□□□□ -0.37
APOC1P02654 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.76□□□□□ -0.37
APOC1P02654 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 OR2I1P-208ENST00000641137 4948 ntBASIC12.76□□□□□ -0.37
APOC1P02654 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
APOC1P02654 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
APOC1P02654 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.76□□□□□ -0.37
APOC1P02654 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.76□□□□□ -0.37
APOC1P02654 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.76□□□□□ -0.37
APOC1P02654 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.76□□□□□ -0.37
APOC1P02654 AC007551.1-201ENST00000457394 519 ntBASIC12.76□□□□□ -0.37
APOC1P02654 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.76□□□□□ -0.37
APOC1P02654 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.76□□□□□ -0.37
APOC1P02654 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 AC008735.3-201ENST00000596646 500 ntBASIC12.76□□□□□ -0.37
APOC1P02654 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.76□□□□□ -0.37
APOC1P02654 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.76□□□□□ -0.37
APOC1P02654 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
APOC1P02654 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOC1P02654 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
APOC1P02654 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
APOC1P02654 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.76□□□□□ -0.37
APOC1P02654 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC1P02654 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
APOC1P02654 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms