Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 AC114271.1-201ENST00000612689 2813 ntBASIC12.85□□□□□ -0.35
COPS3Q9UNS2 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 AGAP12P-201ENST00000585227 2359 ntBASIC12.85□□□□□ -0.35
COPS3Q9UNS2 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COPS3Q9UNS2 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 MIR770-201ENST00000390219 98 ntBASIC12.84□□□□□ -0.35
COPS3Q9UNS2 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 AC236430.1-201ENST00000402231 743 ntBASIC12.84□□□□□ -0.35
COPS3Q9UNS2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.84□□□□□ -0.35
COPS3Q9UNS2 AC005014.1-201ENST00000432006 2976 ntBASIC12.84□□□□□ -0.35
COPS3Q9UNS2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 AC190387.1-201ENST00000551683 408 ntBASIC12.84□□□□□ -0.35
COPS3Q9UNS2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 AC010319.3-201ENST00000597028 470 ntBASIC12.84□□□□□ -0.35
COPS3Q9UNS2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 TRIM80P-201ENST00000455685 2848 ntBASIC12.84□□□□□ -0.35
COPS3Q9UNS2 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.84□□□□□ -0.35
COPS3Q9UNS2 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
COPS3Q9UNS2 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
COPS3Q9UNS2 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
COPS3Q9UNS2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
COPS3Q9UNS2 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
COPS3Q9UNS2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
COPS3Q9UNS2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.83□□□□□ -0.36
COPS3Q9UNS2 AP001889.1-201ENST00000525414 633 ntBASIC12.83□□□□□ -0.36
COPS3Q9UNS2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 AC025279.2-201ENST00000569730 653 ntBASIC12.83□□□□□ -0.36
COPS3Q9UNS2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.83□□□□□ -0.36
COPS3Q9UNS2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms