Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC17.77■□□□□ 0.44
SCN11AQ9UI33 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC17.77■□□□□ 0.44
SCN11AQ9UI33 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC17.77■□□□□ 0.44
SCN11AQ9UI33 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCN11AQ9UI33 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC17.77■□□□□ 0.44
SCN11AQ9UI33 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCN11AQ9UI33 AL157996.1-201ENST00000624684 2299 ntBASIC17.77■□□□□ 0.44
SCN11AQ9UI33 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SCN11AQ9UI33 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
SCN11AQ9UI33 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 STK16-202ENST00000409260 1493 ntTSL 5 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 CFL1P6-201ENST00000400899 494 ntBASIC17.76■□□□□ 0.43
SCN11AQ9UI33 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 MIR5091-201ENST00000578707 93 ntBASIC17.76■□□□□ 0.43
SCN11AQ9UI33 KRT18P8-201ENST00000581937 1246 ntBASIC17.76■□□□□ 0.43
SCN11AQ9UI33 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 NQO2-204ENST00000380454 851 ntTSL 2 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 CASP16P-204ENST00000635032 809 ntBASIC17.76■□□□□ 0.43
SCN11AQ9UI33 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN11AQ9UI33 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 GUCY2EP-203ENST00000531117 1918 ntBASIC17.75■□□□□ 0.43
SCN11AQ9UI33 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 AC133141.1-201ENST00000443015 339 ntBASIC17.75■□□□□ 0.43
SCN11AQ9UI33 AC120498.7-201ENST00000562876 330 ntBASIC17.75■□□□□ 0.43
SCN11AQ9UI33 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 AC040160.2-201ENST00000623816 1675 ntBASIC17.75■□□□□ 0.43
SCN11AQ9UI33 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 FAM226B-201ENST00000602508 1490 ntBASIC17.75■□□□□ 0.43
SCN11AQ9UI33 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN11AQ9UI33 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 ENPP7P8-202ENST00000527856 1345 ntBASIC17.74■□□□□ 0.43
SCN11AQ9UI33 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN11AQ9UI33 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms