Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 SPATA22-203ENST00000397168 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIMBP3Q9UFD9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 AP000925.1-201ENST00000425960 1449 ntBASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 AL031587.5-201ENST00000624344 1849 ntBASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 KRTAP13-1-201ENST00000355459 749 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 TEDDM2P-201ENST00000414169 786 ntBASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 AC253536.2-201ENST00000423307 254 ntBASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 AC010677.1-201ENST00000441690 412 ntBASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 AC005077.3-201ENST00000449614 213 ntBASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 AC110285.1-201ENST00000572077 665 ntTSL 3 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 AL139424.3-202ENST00000641619 917 ntBASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIMBP3Q9UFD9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC21.45■■□□□ 1.03
RIMBP3Q9UFD9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RIMBP3Q9UFD9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
RIMBP3Q9UFD9 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 AC011890.1-201ENST00000427955 303 ntBASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 CD63-212ENST00000552067 621 ntTSL 5 BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 AC116553.1-201ENST00000561752 397 ntBASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 AP001120.3-201ENST00000585729 489 ntBASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 AP000437.1-201ENST00000624057 2085 ntBASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 AC025538.1-201ENST00000510707 1486 ntBASIC21.45■■□□□ 1.02
RIMBP3Q9UFD9 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 VTI1BP2-201ENST00000394154 696 ntBASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 AC246680.1-201ENST00000444624 494 ntTSL 3 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 AK2-208ENST00000487289 920 ntTSL 2 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 DERL1-204ENST00000519018 575 ntTSL 4 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 MYL6-210ENST00000548400 573 ntTSL 3 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 RHOJ-202ENST00000555125 548 ntTSL 2 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 AC009034.1-201ENST00000568125 669 ntTSL 2 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 KIR2DP1-201ENST00000415311 1331 ntBASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 IQCD-201ENST00000299732 1369 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 HUS1-202ENST00000432325 1125 ntTSL 5 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 AL929472.4-201ENST00000447422 691 ntBASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 AL356479.1-202ENST00000456933 714 ntTSL 3 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 LINC02354-202ENST00000548564 573 ntTSL 4 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 FANCI-214ENST00000567996 1070 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 SRP9-205ENST00000626563 329 ntTSL 5 BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIMBP3Q9UFD9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms