Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMG20BQ9P0W2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMG20BQ9P0W2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 AC067750.1-201ENST00000608826 6545 ntBASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 AC090643.2-201ENST00000623442 2029 ntBASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMG20BQ9P0W2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 MIR645-201ENST00000385283 94 ntBASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 AL592076.1-201ENST00000424448 303 ntBASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 AC007952.5-201ENST00000572818 1486 ntBASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 MIR4722-201ENST00000578292 60 ntBASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 AC073352.2-201ENST00000609385 439 ntBASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 AL805961.1-201ENST00000642026 753 ntBASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20BQ9P0W2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20BQ9P0W2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20BQ9P0W2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20BQ9P0W2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20BQ9P0W2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20BQ9P0W2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.33■□□□□ 0.37
HMG20BQ9P0W2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.33■□□□□ 0.37
HMG20BQ9P0W2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20BQ9P0W2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20BQ9P0W2 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HMG20BQ9P0W2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms