Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 CD8B2-202ENST00000417670 633 ntBASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 FAM197Y7-201ENST00000432892 766 ntBASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 AL358472.3-201ENST00000608147 415 ntBASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 AC027601.3-201ENST00000622907 509 ntBASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HDHD3Q9BSH5 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 BCRP1-201ENST00000444246 691 ntBASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 AL355864.2-201ENST00000447420 863 ntBASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 RNA5SP486-201ENST00000515961 83 ntBASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 AC027796.2-201ENST00000575326 344 ntBASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 AC073413.1-201ENST00000603927 732 ntBASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 AC132938.4-201ENST00000623835 848 ntBASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HDHD3Q9BSH5 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HDHD3Q9BSH5 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms