Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 AC108024.1-201ENST00000626286 1721 ntBASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 AC092028.1-202ENST00000641483 3547 ntBASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 AC092028.1-201ENST00000641781 3540 ntBASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 KRT18P35-201ENST00000510488 1269 ntBASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 AC145285.3-201ENST00000564603 959 ntBASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 AP001005.1-201ENST00000571755 1248 ntBASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 AL109936.8-201ENST00000641772 604 ntBASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SEC22CQ9BRL7 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms