Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.31□□□□□ -0.28
HPS1Q92902 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HPS1Q92902 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HPS1Q92902 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.31□□□□□ -0.28
HPS1Q92902 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.31□□□□□ -0.28
HPS1Q92902 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.31□□□□□ -0.28
HPS1Q92902 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.31□□□□□ -0.28
HPS1Q92902 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.31□□□□□ -0.28
HPS1Q92902 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.31□□□□□ -0.28
HPS1Q92902 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.31□□□□□ -0.28
HPS1Q92902 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC13.31□□□□□ -0.28
HPS1Q92902 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.31□□□□□ -0.28
HPS1Q92902 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.31□□□□□ -0.28
HPS1Q92902 TPT1P11-201ENST00000458482 498 ntBASIC13.31□□□□□ -0.28
HPS1Q92902 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.31□□□□□ -0.28
HPS1Q92902 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.31□□□□□ -0.28
HPS1Q92902 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HPS1Q92902 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.31□□□□□ -0.28
HPS1Q92902 RARRES2P5-201ENST00000564013 466 ntBASIC13.31□□□□□ -0.28
HPS1Q92902 AC097359.3-201ENST00000603982 1210 ntBASIC13.31□□□□□ -0.28
HPS1Q92902 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.31□□□□□ -0.28
HPS1Q92902 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.31□□□□□ -0.28
HPS1Q92902 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.31□□□□□ -0.28
HPS1Q92902 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HPS1Q92902 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HPS1Q92902 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HPS1Q92902 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HPS1Q92902 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HPS1Q92902 AC111170.3-201ENST00000624282 2464 ntBASIC13.3□□□□□ -0.28
HPS1Q92902 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.3□□□□□ -0.28
HPS1Q92902 AL607033.1-201ENST00000623900 1599 ntBASIC13.3□□□□□ -0.28
HPS1Q92902 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.3□□□□□ -0.28
HPS1Q92902 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.3□□□□□ -0.28
HPS1Q92902 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.3□□□□□ -0.28
HPS1Q92902 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.3□□□□□ -0.28
HPS1Q92902 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 ELK1P1-201ENST00000485699 580 ntBASIC13.3□□□□□ -0.28
HPS1Q92902 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.3□□□□□ -0.28
HPS1Q92902 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC13.3□□□□□ -0.28
HPS1Q92902 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC13.3□□□□□ -0.28
HPS1Q92902 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.3□□□□□ -0.28
HPS1Q92902 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.3□□□□□ -0.28
HPS1Q92902 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 WASH4P-201ENST00000564273 1246 ntBASIC13.3□□□□□ -0.28
HPS1Q92902 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.3□□□□□ -0.28
HPS1Q92902 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
HPS1Q92902 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.3□□□□□ -0.28
HPS1Q92902 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 MIR6805-201ENST00000615055 62 ntBASIC13.3□□□□□ -0.28
HPS1Q92902 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HPS1Q92902 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
HPS1Q92902 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HPS1Q92902 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms