Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 ST20-AS1-201ENST00000560255 4223 ntBASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 RPL18AP15-201ENST00000430258 517 ntBASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 POLR2LP1-206ENST00000444785 187 ntBASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 AC022121.1-201ENST00000484584 579 ntBASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 AC093700.1-201ENST00000503348 717 ntBASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC11.83□□□□□ -0.52
CCDC168Q8NDH2 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 AC092135.3-201ENST00000624151 1846 ntBASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 AL121753.2-201ENST00000624581 1461 ntBASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CCDC168Q8NDH2 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms