Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 AL354989.2-201ENST00000435838 1540 ntBASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 LINC02486-201ENST00000604157 3000 ntBASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 AC016694.1-201ENST00000434179 700 ntBASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 AL023775.1-201ENST00000454907 1746 ntBASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 CROCCP4-201ENST00000457096 498 ntBASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 AC007551.1-201ENST00000457394 519 ntBASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 KRT90P-201ENST00000549264 1064 ntBASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 AC073413.1-201ENST00000603927 732 ntBASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 CU639417.3-201ENST00000624240 1404 ntBASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
CLDN22Q8N7P3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN22Q8N7P3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CLDN22Q8N7P3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN22Q8N7P3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.08□□□□□ -0.31
CLDN22Q8N7P3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN22Q8N7P3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN22Q8N7P3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN22Q8N7P3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
CLDN22Q8N7P3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN22Q8N7P3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 AL136309.1-201ENST00000403917 691 ntBASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 MIR497HG-202ENST00000572453 3838 ntBASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDN22Q8N7P3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms