Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TTC9CQ8N5M4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 OR8S1-201ENST00000310194 1080 ntBASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 BTBD6P1-201ENST00000412176 1267 ntBASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AC006122.1-201ENST00000493323 440 ntBASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 RPSAP36-202ENST00000494591 1261 ntBASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 MFF-223ENST00000524634 647 ntTSL 2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AC003686.1-201ENST00000550956 1034 ntBASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AL160314.3-201ENST00000556041 767 ntBASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 RN7SL560P-201ENST00000577943 264 ntBASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AC005962.1-201ENST00000584100 773 ntBASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AL591471.1-201ENST00000621855 229 ntBASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AC090386.2-201ENST00000623010 1039 ntBASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AC118758.2-201ENST00000614242 2813 ntBASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 KRT8P29-201ENST00000420409 1371 ntBASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TTC9CQ8N5M4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 AHCYP4-201ENST00000419201 1315 ntBASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.36□□□□□ -0.59
TTC9CQ8N5M4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms