Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 AQP7P4-201ENST00000447083 1042 ntBASIC15.24■□□□□ 0.03
RNF135Q8IUD6 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 AQP7P2-201ENST00000453967 1041 ntBASIC15.24■□□□□ 0.03
RNF135Q8IUD6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 AQP7P3-201ENST00000624547 1041 ntBASIC15.24■□□□□ 0.03
RNF135Q8IUD6 MME-218ENST00000625667 363 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 FAM90A21P-201ENST00000510875 1396 ntBASIC15.24■□□□□ 0.03
RNF135Q8IUD6 FAM90A15P-201ENST00000514465 1395 ntBASIC15.24■□□□□ 0.03
RNF135Q8IUD6 FAM90A6P-201ENST00000515148 1394 ntBASIC15.24■□□□□ 0.03
RNF135Q8IUD6 FAM90A16P-201ENST00000526662 1395 ntBASIC15.24■□□□□ 0.03
RNF135Q8IUD6 FAM90A9P-201ENST00000527940 1395 ntBASIC15.24■□□□□ 0.03
RNF135Q8IUD6 FAM90A5P-201ENST00000528738 1395 ntBASIC15.24■□□□□ 0.03
RNF135Q8IUD6 FAM90A14P-201ENST00000530386 1395 ntBASIC15.24■□□□□ 0.03
RNF135Q8IUD6 FAM90A13P-201ENST00000534703 1395 ntBASIC15.24■□□□□ 0.03
RNF135Q8IUD6 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 MRPL37P1-201ENST00000592451 1337 ntBASIC15.23■□□□□ 0.03
RNF135Q8IUD6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 COX20P1-201ENST00000366529 357 ntBASIC15.23■□□□□ 0.03
RNF135Q8IUD6 AL357373.1-201ENST00000394974 322 ntBASIC15.23■□□□□ 0.03
RNF135Q8IUD6 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 AC114947.1-202ENST00000514136 344 ntBASIC15.23■□□□□ 0.03
RNF135Q8IUD6 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF135Q8IUD6 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms