Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 AC105233.6-201ENST00000642093 218 ntBASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 AC134312.5-201ENST00000568031 1313 ntBASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 AC015802.1-201ENST00000588104 1449 ntBASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 AC022400.8-201ENST00000623453 3599 ntBASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM53Q6P2H8 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM53Q6P2H8 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM53Q6P2H8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM53Q6P2H8 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM53Q6P2H8 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.27□□□□□ -0.28
TMEM53Q6P2H8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM53Q6P2H8 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.27□□□□□ -0.28
TMEM53Q6P2H8 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 TTTY23B-201ENST00000442790 549 ntBASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 GIMAP3P-201ENST00000495150 836 ntBASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 MIR5189-201ENST00000577370 114 ntBASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 LINC02084-201ENST00000606069 1096 ntBASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 AL157414.3-201ENST00000624276 1954 ntBASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM53Q6P2H8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM53Q6P2H8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms