Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RC3H1Q5TC82 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RC3H1Q5TC82 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RC3H1Q5TC82 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 KRT18P33-201ENST00000398525 1043 ntBASIC17.59■□□□□ 0.41
RC3H1Q5TC82 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 AC012183.1-201ENST00000625197 499 ntBASIC17.59■□□□□ 0.41
RC3H1Q5TC82 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RC3H1Q5TC82 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC17.58■□□□□ 0.41
RC3H1Q5TC82 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RC3H1Q5TC82 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RC3H1Q5TC82 AC008620.2-201ENST00000510294 1569 ntBASIC17.58■□□□□ 0.41
RC3H1Q5TC82 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RC3H1Q5TC82 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC17.58■□□□□ 0.41
RC3H1Q5TC82 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RC3H1Q5TC82 FGD5P1-202ENST00000614866 2498 ntBASIC17.58■□□□□ 0.41
RC3H1Q5TC82 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RC3H1Q5TC82 TUBB8P4-201ENST00000511806 1324 ntBASIC17.58■□□□□ 0.4
RC3H1Q5TC82 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 AC112250.1-201ENST00000504640 745 ntBASIC17.58■□□□□ 0.4
RC3H1Q5TC82 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 AC016582.2-202ENST00000587765 1094 ntBASIC17.58■□□□□ 0.4
RC3H1Q5TC82 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 AL139424.3-202ENST00000641619 917 ntBASIC17.58■□□□□ 0.4
RC3H1Q5TC82 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 AC023824.1-201ENST00000562945 2975 ntBASIC17.58■□□□□ 0.4
RC3H1Q5TC82 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RC3H1Q5TC82 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 AC064850.1-201ENST00000413279 1398 ntBASIC17.57■□□□□ 0.4
RC3H1Q5TC82 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 GUCY2EP-203ENST00000531117 1918 ntBASIC17.57■□□□□ 0.4
RC3H1Q5TC82 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 AL773545.2-201ENST00000442149 472 ntBASIC17.57■□□□□ 0.4
RC3H1Q5TC82 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 SRPK2P-201ENST00000523408 1100 ntBASIC17.57■□□□□ 0.4
RC3H1Q5TC82 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 AC090510.3-201ENST00000615831 821 ntBASIC17.57■□□□□ 0.4
RC3H1Q5TC82 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RC3H1Q5TC82 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms