Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RBM48Q5RL73 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.1□□□□□ -0.31
RBM48Q5RL73 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RBM48Q5RL73 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RBM48Q5RL73 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
RBM48Q5RL73 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RBM48Q5RL73 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.1□□□□□ -0.31
RBM48Q5RL73 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RBM48Q5RL73 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 LINC00638-201ENST00000555578 2518 ntBASIC13.09□□□□□ -0.31
RBM48Q5RL73 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 HLA-J-203ENST00000494367 1087 ntBASIC13.09□□□□□ -0.31
RBM48Q5RL73 MEIS3P1-201ENST00000495167 958 ntBASIC13.09□□□□□ -0.31
RBM48Q5RL73 ALG3P1-201ENST00000508806 1114 ntBASIC13.09□□□□□ -0.31
RBM48Q5RL73 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 AC009093.7-201ENST00000623853 1223 ntBASIC13.09□□□□□ -0.31
RBM48Q5RL73 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RBM48Q5RL73 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 AC061965.1-201ENST00000560524 1465 ntBASIC13.09□□□□□ -0.31
RBM48Q5RL73 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RBM48Q5RL73 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RBM48Q5RL73 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RBM48Q5RL73 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.08□□□□□ -0.31
RBM48Q5RL73 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC13.08□□□□□ -0.31
RBM48Q5RL73 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RBM48Q5RL73 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
RBM48Q5RL73 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
RBM48Q5RL73 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
RBM48Q5RL73 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RBM48Q5RL73 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RBM48Q5RL73 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 SHC1P1-201ENST00000425230 1745 ntBASIC13.08□□□□□ -0.32
RBM48Q5RL73 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 RNU1-114P-201ENST00000365297 166 ntBASIC13.08□□□□□ -0.32
RBM48Q5RL73 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 AC005829.1-201ENST00000570002 483 ntBASIC13.08□□□□□ -0.32
RBM48Q5RL73 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RBM48Q5RL73 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RBM48Q5RL73 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms