Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CERKLQ49MI3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CERKLQ49MI3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CERKLQ49MI3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CERKLQ49MI3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CERKLQ49MI3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CERKLQ49MI3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CERKLQ49MI3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.63■□□□□ 0.25
CERKLQ49MI3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.63■□□□□ 0.25
CERKLQ49MI3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CERKLQ49MI3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CERKLQ49MI3 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CERKLQ49MI3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CERKLQ49MI3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CERKLQ49MI3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.63■□□□□ 0.25
CERKLQ49MI3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 AL357563.1-201ENST00000404728 395 ntBASIC16.62■□□□□ 0.25
CERKLQ49MI3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 KRT8P2-201ENST00000556193 944 ntBASIC16.62■□□□□ 0.25
CERKLQ49MI3 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 AP005264.5-201ENST00000590066 467 ntBASIC16.62■□□□□ 0.25
CERKLQ49MI3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CERKLQ49MI3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.62■□□□□ 0.25
CERKLQ49MI3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 KRT8P43-201ENST00000406052 1458 ntBASIC16.61■□□□□ 0.25
CERKLQ49MI3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 AL627389.1-201ENST00000413508 1182 ntBASIC16.61■□□□□ 0.25
CERKLQ49MI3 AL355334.1-201ENST00000417713 215 ntBASIC16.61■□□□□ 0.25
CERKLQ49MI3 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 MIR4265-201ENST00000582152 99 ntBASIC16.61■□□□□ 0.25
CERKLQ49MI3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.61■□□□□ 0.25
CERKLQ49MI3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CERKLQ49MI3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms