Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB1AP62820 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB1AP62820 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RAB1AP62820 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
RAB1AP62820 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB1AP62820 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
RAB1AP62820 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB1AP62820 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
RAB1AP62820 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RAB1AP62820 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.66□□□□□ -0.38
RAB1AP62820 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 VDAC1P1-201ENST00000439229 848 ntBASIC12.66□□□□□ -0.38
RAB1AP62820 AC006033.1-201ENST00000440505 426 ntBASIC12.66□□□□□ -0.38
RAB1AP62820 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
RAB1AP62820 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB1AP62820 AC124068.2-201ENST00000569473 1109 ntBASIC12.66□□□□□ -0.38
RAB1AP62820 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 AC021016.3-201ENST00000608367 477 ntBASIC12.66□□□□□ -0.38
RAB1AP62820 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RAB1AP62820 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB1AP62820 HSPA8P5-201ENST00000456928 2069 ntBASIC12.66□□□□□ -0.38
RAB1AP62820 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 FAM90A7P-201ENST00000382628 1395 ntBASIC12.66□□□□□ -0.38
RAB1AP62820 FAM90A23P-201ENST00000400136 1395 ntBASIC12.66□□□□□ -0.38
RAB1AP62820 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB1AP62820 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RAB1AP62820 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB1AP62820 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB1AP62820 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB1AP62820 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB1AP62820 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 AHCYP4-201ENST00000419201 1315 ntBASIC12.65□□□□□ -0.38
RAB1AP62820 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB1AP62820 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RAB1AP62820 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
RAB1AP62820 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RAB1AP62820 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB1AP62820 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB1AP62820 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB1AP62820 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB1AP62820 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB1AP62820 AC044849.1-201ENST00000519737 1188 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms