Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.93□□□□□ -0.34
SUMO3P55854 AL161670.2-201ENST00000557650 1227 ntBASIC12.93□□□□□ -0.34
SUMO3P55854 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
SUMO3P55854 AC244093.1-201ENST00000610837 814 ntBASIC12.93□□□□□ -0.34
SUMO3P55854 CR392039.2-201ENST00000623182 509 ntBASIC12.93□□□□□ -0.34
SUMO3P55854 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SUMO3P55854 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
SUMO3P55854 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.93□□□□□ -0.34
SUMO3P55854 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.93□□□□□ -0.34
SUMO3P55854 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SUMO3P55854 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.92□□□□□ -0.34
SUMO3P55854 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SUMO3P55854 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SUMO3P55854 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.92□□□□□ -0.34
SUMO3P55854 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.92□□□□□ -0.34
SUMO3P55854 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.92□□□□□ -0.34
SUMO3P55854 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SUMO3P55854 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.92□□□□□ -0.34
SUMO3P55854 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SUMO3P55854 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.92□□□□□ -0.34
SUMO3P55854 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
SUMO3P55854 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.92□□□□□ -0.34
SUMO3P55854 BX679664.3-201ENST00000414070 555 ntBASIC12.92□□□□□ -0.34
SUMO3P55854 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.92□□□□□ -0.34
SUMO3P55854 AC113935.1-201ENST00000471722 555 ntBASIC12.92□□□□□ -0.34
SUMO3P55854 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SUMO3P55854 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.92□□□□□ -0.34
SUMO3P55854 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
SUMO3P55854 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.92□□□□□ -0.34
SUMO3P55854 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.92□□□□□ -0.34
SUMO3P55854 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.92□□□□□ -0.34
SUMO3P55854 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 RN7SL774P-201ENST00000577467 290 ntBASIC12.92□□□□□ -0.34
SUMO3P55854 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.92□□□□□ -0.34
SUMO3P55854 AC103810.3-201ENST00000583567 96 ntBASIC12.92□□□□□ -0.34
SUMO3P55854 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.92□□□□□ -0.34
SUMO3P55854 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SUMO3P55854 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SUMO3P55854 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SUMO3P55854 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.92□□□□□ -0.34
SUMO3P55854 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
SUMO3P55854 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SUMO3P55854 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.91□□□□□ -0.34
SUMO3P55854 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 AC117489.1-201ENST00000625169 3217 ntBASIC12.91□□□□□ -0.34
SUMO3P55854 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms