Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH4P55283 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH4P55283 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH4P55283 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH4P55283 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH4P55283 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDH4P55283 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH4P55283 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH4P55283 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
CDH4P55283 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH4P55283 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH4P55283 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH4P55283 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH4P55283 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.58□□□□□ -0.07
CDH4P55283 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
CDH4P55283 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH4P55283 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.58□□□□□ -0.07
CDH4P55283 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.58□□□□□ -0.07
CDH4P55283 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH4P55283 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH4P55283 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CDH4P55283 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
CDH4P55283 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH4P55283 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH4P55283 BX679664.3-201ENST00000414070 555 ntBASIC14.58□□□□□ -0.08
CDH4P55283 AL807761.2-201ENST00000422849 729 ntBASIC14.58□□□□□ -0.08
CDH4P55283 AC113935.1-201ENST00000471722 555 ntBASIC14.58□□□□□ -0.08
CDH4P55283 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH4P55283 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH4P55283 RHOQP1-201ENST00000555758 579 ntBASIC14.58□□□□□ -0.08
CDH4P55283 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH4P55283 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH4P55283 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH4P55283 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 AC007326.1-201ENST00000604539 458 ntBASIC14.58□□□□□ -0.08
CDH4P55283 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDH4P55283 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH4P55283 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH4P55283 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH4P55283 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
CDH4P55283 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH4P55283 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH4P55283 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH4P55283 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH4P55283 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH4P55283 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDH4P55283 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH4P55283 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH4P55283 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH4P55283 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH4P55283 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH4P55283 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDH4P55283 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH4P55283 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDH4P55283 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 MIR645-201ENST00000385283 94 ntBASIC14.57□□□□□ -0.08
CDH4P55283 AL627231.1-201ENST00000394467 1125 ntBASIC14.57□□□□□ -0.08
CDH4P55283 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 AL592076.1-201ENST00000424448 303 ntBASIC14.57□□□□□ -0.08
CDH4P55283 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH4P55283 AC005740.1-201ENST00000515639 522 ntBASIC14.57□□□□□ -0.08
CDH4P55283 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH4P55283 NDUFB10P1-201ENST00000567319 521 ntBASIC14.57□□□□□ -0.08
CDH4P55283 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH4P55283 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.57□□□□□ -0.08
CDH4P55283 AC009560.1-201ENST00000620208 434 ntBASIC14.57□□□□□ -0.08
CDH4P55283 AC007718.1-201ENST00000621078 280 ntBASIC14.57□□□□□ -0.08
CDH4P55283 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH4P55283 AC067931.2-201ENST00000623655 2003 ntBASIC14.57□□□□□ -0.08
CDH4P55283 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH4P55283 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH4P55283 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms