Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.83■□□□□ 0.13
TM4SF4P48230 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TM4SF4P48230 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TM4SF4P48230 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TM4SF4P48230 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.83■□□□□ 0.13
TM4SF4P48230 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TM4SF4P48230 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TM4SF4P48230 SFPQP1-201ENST00000446621 1786 ntBASIC15.83■□□□□ 0.12
TM4SF4P48230 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TM4SF4P48230 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TM4SF4P48230 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC15.83■□□□□ 0.12
TM4SF4P48230 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TM4SF4P48230 RBMX2P5-201ENST00000424312 969 ntBASIC15.83■□□□□ 0.12
TM4SF4P48230 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC15.83■□□□□ 0.12
TM4SF4P48230 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC15.83■□□□□ 0.12
TM4SF4P48230 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC15.83■□□□□ 0.12
TM4SF4P48230 RNF7-205ENST00000480908 782 ntTSL 4 BASIC15.83■□□□□ 0.12
TM4SF4P48230 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TM4SF4P48230 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC15.83■□□□□ 0.12
TM4SF4P48230 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC15.83■□□□□ 0.12
TM4SF4P48230 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC15.83■□□□□ 0.12
TM4SF4P48230 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC15.83■□□□□ 0.12
TM4SF4P48230 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC15.83■□□□□ 0.12
TM4SF4P48230 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TM4SF4P48230 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TM4SF4P48230 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC15.83■□□□□ 0.12
TM4SF4P48230 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TM4SF4P48230 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TM4SF4P48230 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TM4SF4P48230 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.83■□□□□ 0.12
TM4SF4P48230 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TM4SF4P48230 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC15.83■□□□□ 0.12
TM4SF4P48230 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TM4SF4P48230 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.83■□□□□ 0.12
TM4SF4P48230 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.83■□□□□ 0.12
TM4SF4P48230 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TM4SF4P48230 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
TM4SF4P48230 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TM4SF4P48230 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TM4SF4P48230 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TM4SF4P48230 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TM4SF4P48230 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TM4SF4P48230 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC15.82■□□□□ 0.12
TM4SF4P48230 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC15.82■□□□□ 0.12
TM4SF4P48230 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.82■□□□□ 0.12
TM4SF4P48230 MTHFD2P7-201ENST00000483867 983 ntBASIC15.82■□□□□ 0.12
TM4SF4P48230 AC104115.1-201ENST00000484005 623 ntBASIC15.82■□□□□ 0.12
TM4SF4P48230 ALDOAP1-201ENST00000491506 1078 ntBASIC15.82■□□□□ 0.12
TM4SF4P48230 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
TM4SF4P48230 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TM4SF4P48230 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC15.82■□□□□ 0.12
TM4SF4P48230 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TM4SF4P48230 RN7SL134P-201ENST00000579756 303 ntBASIC15.82■□□□□ 0.12
TM4SF4P48230 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TM4SF4P48230 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TM4SF4P48230 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
TM4SF4P48230 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.82■□□□□ 0.12
TM4SF4P48230 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TM4SF4P48230 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
TM4SF4P48230 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.81■□□□□ 0.12
TM4SF4P48230 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TM4SF4P48230 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TM4SF4P48230 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TM4SF4P48230 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.81■□□□□ 0.12
TM4SF4P48230 RBP4-203ENST00000371469 814 ntTSL 5 BASIC15.81■□□□□ 0.12
TM4SF4P48230 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC15.81■□□□□ 0.12
TM4SF4P48230 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC15.81■□□□□ 0.12
TM4SF4P48230 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TM4SF4P48230 AL450346.2-201ENST00000495602 1024 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 339.5 ms