Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.94□□□□□ -0.02
MMP13P45452 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP13P45452 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MMP13P45452 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
MMP13P45452 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP13P45452 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.94□□□□□ -0.02
MMP13P45452 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP13P45452 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MMP13P45452 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP13P45452 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP13P45452 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.94□□□□□ -0.02
MMP13P45452 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
MMP13P45452 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
MMP13P45452 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.94□□□□□ -0.02
MMP13P45452 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MMP13P45452 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.93□□□□□ -0.02
MMP13P45452 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP13P45452 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.93□□□□□ -0.02
MMP13P45452 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.93□□□□□ -0.02
MMP13P45452 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MMP13P45452 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP13P45452 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.93□□□□□ -0.02
MMP13P45452 AL354877.1-201ENST00000424412 413 ntBASIC14.93□□□□□ -0.02
MMP13P45452 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP13P45452 RPS2P32-201ENST00000439199 892 ntBASIC14.93□□□□□ -0.02
MMP13P45452 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.93□□□□□ -0.02
MMP13P45452 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP13P45452 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP13P45452 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.93□□□□□ -0.02
MMP13P45452 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP13P45452 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.93□□□□□ -0.02
MMP13P45452 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP13P45452 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 SORD2P-201ENST00000558556 1069 ntBASIC14.93□□□□□ -0.02
MMP13P45452 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP13P45452 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.93□□□□□ -0.02
MMP13P45452 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MMP13P45452 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
MMP13P45452 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP13P45452 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
MMP13P45452 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
MMP13P45452 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.93□□□□□ -0.02
MMP13P45452 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
MMP13P45452 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MMP13P45452 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
MMP13P45452 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MMP13P45452 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP13P45452 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP13P45452 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MMP13P45452 AC135782.3-201ENST00000562782 2105 ntBASIC14.92□□□□□ -0.02
MMP13P45452 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP13P45452 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.92□□□□□ -0.02
MMP13P45452 BTBD6P1-201ENST00000412176 1267 ntBASIC14.92□□□□□ -0.02
MMP13P45452 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.92□□□□□ -0.02
MMP13P45452 HSPB1P2-201ENST00000448722 546 ntBASIC14.92□□□□□ -0.02
MMP13P45452 RPSAP36-202ENST00000494591 1261 ntBASIC14.92□□□□□ -0.02
MMP13P45452 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MMP13P45452 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.92□□□□□ -0.02
MMP13P45452 FAM86HP-204ENST00000513466 959 ntBASIC14.92□□□□□ -0.02
MMP13P45452 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP13P45452 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.92□□□□□ -0.02
MMP13P45452 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.92□□□□□ -0.02
MMP13P45452 AC027237.1-201ENST00000560942 655 ntBASIC14.92□□□□□ -0.02
MMP13P45452 AC100827.2-201ENST00000563214 1194 ntBASIC14.92□□□□□ -0.02
MMP13P45452 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.92□□□□□ -0.02
MMP13P45452 MIR4783-201ENST00000580343 82 ntBASIC14.92□□□□□ -0.02
MMP13P45452 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.92□□□□□ -0.02
MMP13P45452 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.92□□□□□ -0.02
MMP13P45452 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.92□□□□□ -0.02
MMP13P45452 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms