Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDKN2CP42773 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 AC112492.5-201ENST00000421897 457 ntBASIC13.57□□□□□ -0.24
CDKN2CP42773 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.57□□□□□ -0.24
CDKN2CP42773 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN2CP42773 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN2CP42773 CNN2P10-201ENST00000443067 918 ntBASIC13.57□□□□□ -0.24
CDKN2CP42773 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.57□□□□□ -0.24
CDKN2CP42773 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.57□□□□□ -0.24
CDKN2CP42773 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 AP006547.1-201ENST00000563435 692 ntBASIC13.57□□□□□ -0.24
CDKN2CP42773 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN2CP42773 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN2CP42773 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.57□□□□□ -0.24
CDKN2CP42773 MIR6720-201ENST00000611664 98 ntBASIC13.57□□□□□ -0.24
CDKN2CP42773 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.57□□□□□ -0.24
CDKN2CP42773 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.57□□□□□ -0.24
CDKN2CP42773 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDKN2CP42773 PDIA3P1-201ENST00000471856 1510 ntBASIC13.57□□□□□ -0.24
CDKN2CP42773 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.57□□□□□ -0.24
CDKN2CP42773 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CDKN2CP42773 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.57□□□□□ -0.24
CDKN2CP42773 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CDKN2CP42773 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDKN2CP42773 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.57□□□□□ -0.24
CDKN2CP42773 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.57□□□□□ -0.24
CDKN2CP42773 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 AC244394.1-201ENST00000435000 1665 ntBASIC13.56□□□□□ -0.24
CDKN2CP42773 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 AL445209.1-201ENST00000607269 3491 ntBASIC13.56□□□□□ -0.24
CDKN2CP42773 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN2CP42773 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDKN2CP42773 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN2CP42773 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN2CP42773 AK2P2-201ENST00000439142 405 ntBASIC13.56□□□□□ -0.24
CDKN2CP42773 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CDKN2CP42773 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CDKN2CP42773 AP005018.1-201ENST00000525475 301 ntBASIC13.56□□□□□ -0.24
CDKN2CP42773 DUX4L46-201ENST00000566845 751 ntBASIC13.56□□□□□ -0.24
CDKN2CP42773 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.56□□□□□ -0.24
CDKN2CP42773 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN2CP42773 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN2CP42773 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
CDKN2CP42773 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CDKN2CP42773 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN2CP42773 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CDKN2CP42773 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDKN2CP42773 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.56□□□□□ -0.24
CDKN2CP42773 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.55□□□□□ -0.24
CDKN2CP42773 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDKN2CP42773 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDKN2CP42773 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.55□□□□□ -0.24
CDKN2CP42773 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDKN2CP42773 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDKN2CP42773 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDKN2CP42773 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms