Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PDE6BP35913 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6BP35913 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.41■□□□□ 0.38
PDE6BP35913 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6BP35913 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6BP35913 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.41■□□□□ 0.38
PDE6BP35913 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6BP35913 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6BP35913 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6BP35913 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.41■□□□□ 0.38
PDE6BP35913 SIRPB3P-201ENST00000340424 1216 ntBASIC17.41■□□□□ 0.38
PDE6BP35913 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC17.41■□□□□ 0.38
PDE6BP35913 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC17.41■□□□□ 0.38
PDE6BP35913 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PDE6BP35913 AC023141.7-201ENST00000430646 407 ntBASIC17.41■□□□□ 0.38
PDE6BP35913 BRI3P1-201ENST00000440440 378 ntBASIC17.41■□□□□ 0.38
PDE6BP35913 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC17.41■□□□□ 0.38
PDE6BP35913 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.41■□□□□ 0.38
PDE6BP35913 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC17.41■□□□□ 0.38
PDE6BP35913 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC17.41■□□□□ 0.38
PDE6BP35913 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PDE6BP35913 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PDE6BP35913 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.41■□□□□ 0.38
PDE6BP35913 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6BP35913 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PDE6BP35913 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.41■□□□□ 0.38
PDE6BP35913 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PDE6BP35913 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PDE6BP35913 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6BP35913 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC17.41■□□□□ 0.38
PDE6BP35913 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.41■□□□□ 0.38
PDE6BP35913 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6BP35913 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
PDE6BP35913 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PDE6BP35913 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PDE6BP35913 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.4■□□□□ 0.38
PDE6BP35913 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
PDE6BP35913 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.4■□□□□ 0.38
PDE6BP35913 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.4■□□□□ 0.38
PDE6BP35913 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PDE6BP35913 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDE6BP35913 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC17.4■□□□□ 0.38
PDE6BP35913 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC17.4■□□□□ 0.38
PDE6BP35913 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.4■□□□□ 0.38
PDE6BP35913 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.4■□□□□ 0.38
PDE6BP35913 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC17.4■□□□□ 0.38
PDE6BP35913 BCL2L12P1-201ENST00000508390 733 ntBASIC17.4■□□□□ 0.38
PDE6BP35913 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.4■□□□□ 0.38
PDE6BP35913 AC004801.1-201ENST00000549557 360 ntBASIC17.4■□□□□ 0.38
PDE6BP35913 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.4■□□□□ 0.38
PDE6BP35913 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC17.4■□□□□ 0.38
PDE6BP35913 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.4■□□□□ 0.38
PDE6BP35913 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PDE6BP35913 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDE6BP35913 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDE6BP35913 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDE6BP35913 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6BP35913 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
PDE6BP35913 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
PDE6BP35913 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.39■□□□□ 0.38
PDE6BP35913 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6BP35913 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6BP35913 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6BP35913 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6BP35913 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.39■□□□□ 0.37
PDE6BP35913 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6BP35913 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6BP35913 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6BP35913 RHOC-205ENST00000369636 786 ntTSL 2 BASIC17.39■□□□□ 0.37
PDE6BP35913 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PDE6BP35913 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC17.39■□□□□ 0.37
PDE6BP35913 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6BP35913 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6BP35913 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC17.39■□□□□ 0.37
PDE6BP35913 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC17.39■□□□□ 0.37
PDE6BP35913 ALG1L7P-201ENST00000502317 768 ntBASIC17.39■□□□□ 0.37
PDE6BP35913 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
PDE6BP35913 IGHEP1-201ENST00000521393 651 ntBASIC17.39■□□□□ 0.37
PDE6BP35913 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC17.39■□□□□ 0.37
PDE6BP35913 RN7SL605P-201ENST00000577229 281 ntBASIC17.39■□□□□ 0.37
PDE6BP35913 FBXO36P1-201ENST00000579006 471 ntBASIC17.39■□□□□ 0.37
PDE6BP35913 FTLP5-201ENST00000586853 534 ntBASIC17.39■□□□□ 0.37
PDE6BP35913 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms