Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT9P35527 AGAP12P-201ENST00000585227 2359 ntBASIC15.73■□□□□ 0.11
KRT9P35527 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
KRT9P35527 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
KRT9P35527 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT9P35527 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT9P35527 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
KRT9P35527 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT9P35527 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT9P35527 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT9P35527 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
KRT9P35527 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
KRT9P35527 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.73■□□□□ 0.11
KRT9P35527 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT9P35527 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT9P35527 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
KRT9P35527 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.73■□□□□ 0.11
KRT9P35527 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT9P35527 RN7SL713P-201ENST00000582127 302 ntBASIC15.73■□□□□ 0.11
KRT9P35527 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT9P35527 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT9P35527 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.73■□□□□ 0.11
KRT9P35527 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT9P35527 RHOXF1P1-202ENST00000635473 501 ntBASIC15.73■□□□□ 0.11
KRT9P35527 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
KRT9P35527 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT9P35527 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT9P35527 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT9P35527 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 PDIA3P1-201ENST00000471856 1510 ntBASIC15.73■□□□□ 0.11
KRT9P35527 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT9P35527 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT9P35527 AHCYP2-201ENST00000430630 1300 ntBASIC15.72■□□□□ 0.11
KRT9P35527 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
KRT9P35527 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
KRT9P35527 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT9P35527 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT9P35527 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT9P35527 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
KRT9P35527 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
KRT9P35527 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 BOLA2P3-201ENST00000404566 256 ntBASIC15.72■□□□□ 0.11
KRT9P35527 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.72■□□□□ 0.11
KRT9P35527 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.72■□□□□ 0.11
KRT9P35527 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.72■□□□□ 0.11
KRT9P35527 RPL7P3-201ENST00000441388 714 ntBASIC15.72■□□□□ 0.11
KRT9P35527 AC234783.1-201ENST00000441761 496 ntBASIC15.72■□□□□ 0.11
KRT9P35527 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.72■□□□□ 0.11
KRT9P35527 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.72■□□□□ 0.11
KRT9P35527 AP003171.2-201ENST00000528208 925 ntBASIC15.72■□□□□ 0.11
KRT9P35527 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
KRT9P35527 AP000812.2-201ENST00000538934 718 ntBASIC15.72■□□□□ 0.11
KRT9P35527 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
KRT9P35527 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT9P35527 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.72■□□□□ 0.11
KRT9P35527 AC106886.1-201ENST00000568660 600 ntBASIC15.72■□□□□ 0.11
KRT9P35527 MIR4683-201ENST00000579659 81 ntBASIC15.72■□□□□ 0.11
KRT9P35527 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT9P35527 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT9P35527 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT9P35527 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms