Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 BAP1-211ENST00000615113 489 ntBASIC10.59□□□□□ -0.71
CKS2P33552 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC10.59□□□□□ -0.71
CKS2P33552 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS2P33552 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
CKS2P33552 NBN-203ENST00000409330 4523 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS2P33552 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC10.59□□□□□ -0.71
CKS2P33552 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CKS2P33552 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
CKS2P33552 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
CKS2P33552 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
CKS2P33552 AC139712.1-201ENST00000378256 1875 ntBASIC10.59□□□□□ -0.71
CKS2P33552 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.59□□□□□ -0.71
CKS2P33552 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC10.59□□□□□ -0.71
CKS2P33552 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CKS2P33552 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CKS2P33552 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
CKS2P33552 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.71
CKS2P33552 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
CKS2P33552 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
CKS2P33552 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC10.58□□□□□ -0.72
CKS2P33552 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 BRF1-202ENST00000379932 884 ntTSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 AL139094.1-201ENST00000405549 1188 ntBASIC10.58□□□□□ -0.72
CKS2P33552 RPL37AP1-201ENST00000412502 279 ntBASIC10.58□□□□□ -0.72
CKS2P33552 SPDYE7P-202ENST00000420373 878 ntBASIC10.58□□□□□ -0.72
CKS2P33552 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC10.58□□□□□ -0.72
CKS2P33552 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 SPDYE14P-201ENST00000442619 822 ntBASIC10.58□□□□□ -0.72
CKS2P33552 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.58□□□□□ -0.72
CKS2P33552 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.58□□□□□ -0.72
CKS2P33552 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC10.58□□□□□ -0.72
CKS2P33552 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 AC103988.2-201ENST00000561804 725 ntBASIC10.58□□□□□ -0.72
CKS2P33552 AC051619.7-201ENST00000568314 623 ntBASIC10.58□□□□□ -0.72
CKS2P33552 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.58□□□□□ -0.72
CKS2P33552 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 AC022145.2-201ENST00000598203 171 ntBASIC10.58□□□□□ -0.72
CKS2P33552 AC107373.2-201ENST00000607735 490 ntBASIC10.58□□□□□ -0.72
CKS2P33552 IRF5-214ENST00000613821 595 ntTSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 FAM197Y3-203ENST00000618346 717 ntBASIC10.58□□□□□ -0.72
CKS2P33552 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC10.58□□□□□ -0.72
CKS2P33552 C20orf181-201ENST00000623918 480 ntBASIC10.58□□□□□ -0.72
CKS2P33552 AL603764.1-201ENST00000636452 321 ntBASIC10.58□□□□□ -0.72
CKS2P33552 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
CKS2P33552 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC10.58□□□□□ -0.72
CKS2P33552 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 AL022313.4-201ENST00000562756 2046 ntBASIC10.58□□□□□ -0.72
CKS2P33552 AC010970.1-201ENST00000445125 1848 ntBASIC10.58□□□□□ -0.72
CKS2P33552 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CKS2P33552 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
CKS2P33552 DRD5P1-201ENST00000456605 1438 ntBASIC10.58□□□□□ -0.72
CKS2P33552 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms