Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA5P30532 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA5P30532 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA5P30532 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC17.21■□□□□ 0.35
CHRNA5P30532 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC17.21■□□□□ 0.35
CHRNA5P30532 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.21■□□□□ 0.35
CHRNA5P30532 AC068760.1-201ENST00000493579 1953 ntBASIC17.2■□□□□ 0.34
CHRNA5P30532 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA5P30532 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA5P30532 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.2■□□□□ 0.34
CHRNA5P30532 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA5P30532 CCND3P1-201ENST00000438347 580 ntBASIC17.2■□□□□ 0.34
CHRNA5P30532 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA5P30532 PSME2P2-201ENST00000453033 700 ntBASIC17.2■□□□□ 0.34
CHRNA5P30532 SNRPD2P2-201ENST00000473818 333 ntBASIC17.2■□□□□ 0.34
CHRNA5P30532 AC108724.1-201ENST00000481669 352 ntBASIC17.2■□□□□ 0.34
CHRNA5P30532 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA5P30532 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC17.2■□□□□ 0.34
CHRNA5P30532 LY6E-215ENST00000523847 427 ntTSL 3 BASIC17.2■□□□□ 0.34
CHRNA5P30532 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA5P30532 AC142086.5-202ENST00000562500 217 ntBASIC17.2■□□□□ 0.34
CHRNA5P30532 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA5P30532 AC254633.1-201ENST00000606790 345 ntBASIC17.2■□□□□ 0.34
CHRNA5P30532 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHRNA5P30532 PES1P2-201ENST00000449745 1735 ntBASIC17.2■□□□□ 0.34
CHRNA5P30532 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CHRNA5P30532 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA5P30532 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHRNA5P30532 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHRNA5P30532 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHRNA5P30532 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
CHRNA5P30532 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CHRNA5P30532 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRNA5P30532 MIR611-201ENST00000384869 67 ntBASIC17.19■□□□□ 0.34
CHRNA5P30532 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHRNA5P30532 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 AP000533.1-201ENST00000456143 1177 ntBASIC17.19■□□□□ 0.34
CHRNA5P30532 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRNA5P30532 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC17.19■□□□□ 0.34
CHRNA5P30532 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRNA5P30532 CD44-224ENST00000526669 870 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA5P30532 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC17.19■□□□□ 0.34
CHRNA5P30532 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC17.19■□□□□ 0.34
CHRNA5P30532 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA5P30532 AL512324.3-201ENST00000619383 882 ntBASIC17.19■□□□□ 0.34
CHRNA5P30532 AC009041.4-201ENST00000620075 638 ntBASIC17.19■□□□□ 0.34
CHRNA5P30532 AC020922.4-201ENST00000621389 339 ntBASIC17.19■□□□□ 0.34
CHRNA5P30532 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA5P30532 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 AC007950.2-201ENST00000615045 2347 ntBASIC17.19■□□□□ 0.34
CHRNA5P30532 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA5P30532 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA5P30532 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA5P30532 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA5P30532 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA5P30532 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA5P30532 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA5P30532 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA5P30532 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA5P30532 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA5P30532 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA5P30532 AL022313.4-201ENST00000562756 2046 ntBASIC17.18■□□□□ 0.34
CHRNA5P30532 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CHRNA5P30532 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNA5P30532 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CHRNA5P30532 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA5P30532 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CHRNA5P30532 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA5P30532 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms