Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
PTX3P26022 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PTX3P26022 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PTX3P26022 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
PTX3P26022 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.78□□□□□ -0.2
PTX3P26022 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.78□□□□□ -0.2
PTX3P26022 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.78□□□□□ -0.2
PTX3P26022 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTX3P26022 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.77□□□□□ -0.2
PTX3P26022 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PTX3P26022 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PTX3P26022 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
PTX3P26022 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
PTX3P26022 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
PTX3P26022 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PTX3P26022 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
PTX3P26022 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
PTX3P26022 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.77□□□□□ -0.21
PTX3P26022 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PTX3P26022 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
PTX3P26022 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PTX3P26022 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PTX3P26022 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 GOLGA2P4-201ENST00000441462 777 ntBASIC13.77□□□□□ -0.21
PTX3P26022 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 KRT18P15-201ENST00000458108 1291 ntBASIC13.77□□□□□ -0.21
PTX3P26022 CCT8L1P-201ENST00000465400 1674 ntBASIC13.77□□□□□ -0.21
PTX3P26022 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.77□□□□□ -0.21
PTX3P26022 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.77□□□□□ -0.21
PTX3P26022 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.77□□□□□ -0.21
PTX3P26022 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 AL512310.5-201ENST00000551999 515 ntBASIC13.77□□□□□ -0.21
PTX3P26022 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.77□□□□□ -0.21
PTX3P26022 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.77□□□□□ -0.21
PTX3P26022 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.77□□□□□ -0.21
PTX3P26022 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.77□□□□□ -0.21
PTX3P26022 AL096828.3-201ENST00000615354 462 ntBASIC13.77□□□□□ -0.21
PTX3P26022 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.77□□□□□ -0.21
PTX3P26022 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.77□□□□□ -0.21
PTX3P26022 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
PTX3P26022 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.77□□□□□ -0.21
PTX3P26022 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.77□□□□□ -0.21
PTX3P26022 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PTX3P26022 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTX3P26022 AC130686.1-201ENST00000622936 2466 ntBASIC13.76□□□□□ -0.21
PTX3P26022 CICP17-201ENST00000418553 2377 ntBASIC13.76□□□□□ -0.21
PTX3P26022 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTX3P26022 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PTX3P26022 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTX3P26022 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTX3P26022 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.76□□□□□ -0.21
PTX3P26022 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTX3P26022 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.76□□□□□ -0.21
PTX3P26022 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTX3P26022 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTX3P26022 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.76□□□□□ -0.21
PTX3P26022 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTX3P26022 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTX3P26022 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.76□□□□□ -0.21
PTX3P26022 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PTX3P26022 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTX3P26022 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.76□□□□□ -0.21
PTX3P26022 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
PTX3P26022 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PTX3P26022 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.76□□□□□ -0.21
PTX3P26022 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.76□□□□□ -0.21
PTX3P26022 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTX3P26022 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTX3P26022 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.76□□□□□ -0.21
PTX3P26022 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTX3P26022 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms