Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CHMP24386 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.48□□□□□ -0.25
CHMP24386 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
CHMP24386 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.48□□□□□ -0.25
CHMP24386 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.47□□□□□ -0.25
CHMP24386 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.47□□□□□ -0.25
CHMP24386 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CHMP24386 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CHMP24386 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CHMP24386 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.47□□□□□ -0.25
CHMP24386 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
CHMP24386 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.47□□□□□ -0.25
CHMP24386 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.47□□□□□ -0.25
CHMP24386 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.47□□□□□ -0.25
CHMP24386 GOLGA2P4-201ENST00000441462 777 ntBASIC13.47□□□□□ -0.25
CHMP24386 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CHMP24386 FAM8A2P-201ENST00000528813 1142 ntBASIC13.47□□□□□ -0.25
CHMP24386 AC131206.1-201ENST00000538078 1211 ntBASIC13.47□□□□□ -0.25
CHMP24386 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.47□□□□□ -0.25
CHMP24386 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.47□□□□□ -0.25
CHMP24386 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.47□□□□□ -0.25
CHMP24386 MIR4525-201ENST00000580000 75 ntBASIC13.47□□□□□ -0.25
CHMP24386 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.47□□□□□ -0.25
CHMP24386 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 AC002472.3-201ENST00000640124 621 ntBASIC13.47□□□□□ -0.25
CHMP24386 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 AC005562.1-201ENST00000583030 3219 ntBASIC13.47□□□□□ -0.25
CHMP24386 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CHMP24386 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.47□□□□□ -0.25
CHMP24386 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.47□□□□□ -0.25
CHMP24386 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CHMP24386 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
CHMP24386 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CHMP24386 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CHMP24386 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHMP24386 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CHMP24386 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CHMP24386 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CHMP24386 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CHMP24386 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CHMP24386 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.46□□□□□ -0.25
CHMP24386 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 AC072061.1-201ENST00000569710 2234 ntBASIC13.46□□□□□ -0.25
CHMP24386 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.46□□□□□ -0.25
CHMP24386 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.46□□□□□ -0.25
CHMP24386 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.46□□□□□ -0.25
CHMP24386 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.46□□□□□ -0.25
CHMP24386 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.46□□□□□ -0.25
CHMP24386 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.46□□□□□ -0.25
CHMP24386 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms