Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL1P22362 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CCL1P22362 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
CCL1P22362 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.3□□□□□ -0.44
CCL1P22362 AC234783.1-201ENST00000441761 496 ntBASIC12.3□□□□□ -0.44
CCL1P22362 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL1P22362 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.3□□□□□ -0.44
CCL1P22362 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CCL1P22362 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CCL1P22362 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.3□□□□□ -0.44
CCL1P22362 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.3□□□□□ -0.44
CCL1P22362 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.3□□□□□ -0.44
CCL1P22362 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL1P22362 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL1P22362 AC105233.6-201ENST00000642093 218 ntBASIC12.3□□□□□ -0.44
CCL1P22362 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
CCL1P22362 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
CCL1P22362 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL1P22362 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL1P22362 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCL1P22362 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL1P22362 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 LINC01815-202ENST00000641468 1409 ntBASIC12.29□□□□□ -0.44
CCL1P22362 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCL1P22362 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 AC108024.1-201ENST00000626286 1721 ntBASIC12.29□□□□□ -0.44
CCL1P22362 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCL1P22362 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL1P22362 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL1P22362 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL1P22362 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL1P22362 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.29□□□□□ -0.44
CCL1P22362 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 VDAC1P1-201ENST00000439229 848 ntBASIC12.29□□□□□ -0.44
CCL1P22362 HSPB1P2-201ENST00000448722 546 ntBASIC12.29□□□□□ -0.44
CCL1P22362 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL1P22362 AC005225.4-201ENST00000557330 545 ntBASIC12.29□□□□□ -0.44
CCL1P22362 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL1P22362 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 AL512343.1-201ENST00000605837 169 ntBASIC12.29□□□□□ -0.44
CCL1P22362 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCL1P22362 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL1P22362 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL1P22362 DGCR9-201ENST00000609630 2415 ntBASIC12.29□□□□□ -0.44
CCL1P22362 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL1P22362 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CCL1P22362 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
CCL1P22362 FAM90A7P-201ENST00000382628 1395 ntBASIC12.29□□□□□ -0.44
CCL1P22362 FAM90A23P-201ENST00000400136 1395 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms