Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 AC013355.1-201ENST00000562625 723 ntBASIC14.48□□□□□ -0.09
HLA-DPA1P20036 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 MIR6799-201ENST00000620297 69 ntBASIC14.48□□□□□ -0.09
HLA-DPA1P20036 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 AC041040.2-201ENST00000622926 2899 ntBASIC14.48□□□□□ -0.09
HLA-DPA1P20036 AC131212.3-201ENST00000624087 4219 ntBASIC14.48□□□□□ -0.09
HLA-DPA1P20036 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 AL157996.1-201ENST00000624684 2299 ntBASIC14.48□□□□□ -0.09
HLA-DPA1P20036 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPA1P20036 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 DMBT1P1-203ENST00000636837 4628 ntBASIC14.47□□□□□ -0.09
HLA-DPA1P20036 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 AC007952.5-201ENST00000572818 1486 ntBASIC14.47□□□□□ -0.09
HLA-DPA1P20036 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 AC004898.1-201ENST00000451057 766 ntBASIC14.47□□□□□ -0.09
HLA-DPA1P20036 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 AP002353.1-201ENST00000528257 1599 ntBASIC14.47□□□□□ -0.09
HLA-DPA1P20036 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPA1P20036 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 MARK2P5-201ENST00000507649 634 ntBASIC14.46□□□□□ -0.09
HLA-DPA1P20036 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPA1P20036 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
HLA-DPA1P20036 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms