Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC19.23■□□□□ 0.67
ATF3P18847 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ATF3P18847 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ATF3P18847 AC000077.1-201ENST00000420012 953 ntBASIC19.23■□□□□ 0.67
ATF3P18847 RPL18AP15-201ENST00000430258 517 ntBASIC19.23■□□□□ 0.67
ATF3P18847 AL954722.1-201ENST00000431238 259 ntBASIC19.23■□□□□ 0.67
ATF3P18847 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC19.23■□□□□ 0.67
ATF3P18847 SLC25A15P1-201ENST00000456738 342 ntBASIC19.23■□□□□ 0.67
ATF3P18847 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC19.23■□□□□ 0.67
ATF3P18847 AC022447.5-201ENST00000504817 392 ntBASIC19.23■□□□□ 0.67
ATF3P18847 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC19.23■□□□□ 0.67
ATF3P18847 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC19.23■□□□□ 0.67
ATF3P18847 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC19.23■□□□□ 0.67
ATF3P18847 AC084262.1-201ENST00000567818 751 ntBASIC19.23■□□□□ 0.67
ATF3P18847 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
ATF3P18847 AC123912.6-201ENST00000612657 315 ntBASIC19.23■□□□□ 0.67
ATF3P18847 AC106782.5-201ENST00000616011 337 ntBASIC19.23■□□□□ 0.67
ATF3P18847 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 Z98885.3-201ENST00000624882 1757 ntBASIC19.23■□□□□ 0.67
ATF3P18847 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ATF3P18847 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.23■□□□□ 0.67
ATF3P18847 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
ATF3P18847 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF3P18847 AL354702.1-201ENST00000442006 1960 ntBASIC19.23■□□□□ 0.67
ATF3P18847 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.22■□□□□ 0.67
ATF3P18847 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.22■□□□□ 0.67
ATF3P18847 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.22■□□□□ 0.67
ATF3P18847 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 HMGA1P1-201ENST00000415560 1062 ntBASIC19.22■□□□□ 0.67
ATF3P18847 PGK1P2-201ENST00000431702 1214 ntBASIC19.22■□□□□ 0.67
ATF3P18847 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ATF3P18847 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC19.22■□□□□ 0.67
ATF3P18847 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC19.22■□□□□ 0.67
ATF3P18847 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC19.22■□□□□ 0.67
ATF3P18847 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ATF3P18847 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC19.22■□□□□ 0.67
ATF3P18847 AL139158.3-201ENST00000641212 1562 ntBASIC19.22■□□□□ 0.67
ATF3P18847 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF3P18847 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.22■□□□□ 0.67
ATF3P18847 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC19.21■□□□□ 0.67
ATF3P18847 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ATF3P18847 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.21■□□□□ 0.67
ATF3P18847 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATF3P18847 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 TUBB2BP1-201ENST00000404155 871 ntBASIC19.21■□□□□ 0.67
ATF3P18847 MPV17-209ENST00000405983 859 ntTSL 5 BASIC19.21■□□□□ 0.67
ATF3P18847 AC041040.1-201ENST00000425197 460 ntBASIC19.21■□□□□ 0.67
ATF3P18847 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ATF3P18847 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC19.21■□□□□ 0.67
ATF3P18847 AC079250.1-201ENST00000456046 531 ntBASIC19.21■□□□□ 0.67
ATF3P18847 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 IGHVII-74-1-201ENST00000517572 241 ntBASIC19.21■□□□□ 0.67
ATF3P18847 AC103702.1-201ENST00000548801 2630 ntBASIC19.21■□□□□ 0.67
ATF3P18847 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC19.21■□□□□ 0.67
ATF3P18847 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC19.21■□□□□ 0.67
ATF3P18847 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC19.21■□□□□ 0.67
ATF3P18847 OR3A1-202ENST00000615105 966 ntBASIC19.21■□□□□ 0.67
ATF3P18847 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC19.21■□□□□ 0.67
ATF3P18847 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC19.21■□□□□ 0.67
ATF3P18847 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATF3P18847 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.21■□□□□ 0.67
ATF3P18847 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.2■□□□□ 0.66
ATF3P18847 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC19.2■□□□□ 0.66
ATF3P18847 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 RNF165-205ENST00000588679 2904 ntBASIC19.2■□□□□ 0.66
ATF3P18847 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATF3P18847 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms