Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.5□□□□□ -0.09
VCLP18206 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
VCLP18206 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VCLP18206 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VCLP18206 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VCLP18206 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VCLP18206 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VCLP18206 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.5□□□□□ -0.09
VCLP18206 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
VCLP18206 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.5□□□□□ -0.09
VCLP18206 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VCLP18206 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VCLP18206 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.5□□□□□ -0.09
VCLP18206 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.5□□□□□ -0.09
VCLP18206 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.5□□□□□ -0.09
VCLP18206 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.5□□□□□ -0.09
VCLP18206 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.5□□□□□ -0.09
VCLP18206 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
VCLP18206 MIR4538-201ENST00000581377 78 ntBASIC14.5□□□□□ -0.09
VCLP18206 AC132192.2-201ENST00000596206 1147 ntBASIC14.5□□□□□ -0.09
VCLP18206 AC009884.2-201ENST00000603110 324 ntBASIC14.5□□□□□ -0.09
VCLP18206 AL118558.3-201ENST00000607414 1079 ntBASIC14.5□□□□□ -0.09
VCLP18206 AL008638.5-201ENST00000623814 1298 ntBASIC14.5□□□□□ -0.09
VCLP18206 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VCLP18206 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.5□□□□□ -0.09
VCLP18206 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.5□□□□□ -0.09
VCLP18206 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VCLP18206 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VCLP18206 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VCLP18206 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.5□□□□□ -0.09
VCLP18206 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VCLP18206 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
VCLP18206 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.5□□□□□ -0.09
VCLP18206 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VCLP18206 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.5□□□□□ -0.09
VCLP18206 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
VCLP18206 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VCLP18206 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.49□□□□□ -0.09
VCLP18206 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.49□□□□□ -0.09
VCLP18206 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
VCLP18206 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VCLP18206 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 AC012441.2-201ENST00000444843 739 ntBASIC14.49□□□□□ -0.09
VCLP18206 AC004898.1-201ENST00000451057 766 ntBASIC14.49□□□□□ -0.09
VCLP18206 AP001258.2-201ENST00000529891 490 ntBASIC14.49□□□□□ -0.09
VCLP18206 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.49□□□□□ -0.09
VCLP18206 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.49□□□□□ -0.09
VCLP18206 MIR4525-201ENST00000580000 75 ntBASIC14.49□□□□□ -0.09
VCLP18206 AC009955.4-201ENST00000597192 544 ntBASIC14.49□□□□□ -0.09
VCLP18206 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.49□□□□□ -0.09
VCLP18206 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.49□□□□□ -0.09
VCLP18206 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.49□□□□□ -0.09
VCLP18206 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VCLP18206 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.48□□□□□ -0.09
VCLP18206 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
VCLP18206 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.48□□□□□ -0.09
VCLP18206 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.48□□□□□ -0.09
VCLP18206 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 AC006033.1-201ENST00000440505 426 ntBASIC14.48□□□□□ -0.09
VCLP18206 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.48□□□□□ -0.09
VCLP18206 CICP12-201ENST00000455801 843 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms