Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
CTLA4P16410 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.72□□□□□ -0.37
CTLA4P16410 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CTLA4P16410 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.72□□□□□ -0.37
CTLA4P16410 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 OR2R1P-201ENST00000441404 914 ntBASIC12.72□□□□□ -0.37
CTLA4P16410 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.72□□□□□ -0.37
CTLA4P16410 HSPB1P2-201ENST00000448722 546 ntBASIC12.72□□□□□ -0.37
CTLA4P16410 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 AC022210.1-201ENST00000449856 793 ntBASIC12.72□□□□□ -0.37
CTLA4P16410 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.72□□□□□ -0.37
CTLA4P16410 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.72□□□□□ -0.37
CTLA4P16410 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.72□□□□□ -0.37
CTLA4P16410 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.72□□□□□ -0.37
CTLA4P16410 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.72□□□□□ -0.37
CTLA4P16410 PGAM1P5-201ENST00000548011 764 ntBASIC12.72□□□□□ -0.37
CTLA4P16410 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 AL591471.1-201ENST00000621855 229 ntBASIC12.72□□□□□ -0.37
CTLA4P16410 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CTLA4P16410 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CTLA4P16410 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.72□□□□□ -0.37
CTLA4P16410 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.72□□□□□ -0.37
CTLA4P16410 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.72□□□□□ -0.37
CTLA4P16410 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CTLA4P16410 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.72□□□□□ -0.37
CTLA4P16410 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CTLA4P16410 AC087386.2-201ENST00000623212 4637 ntBASIC12.72□□□□□ -0.37
CTLA4P16410 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.72□□□□□ -0.37
CTLA4P16410 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.72□□□□□ -0.37
CTLA4P16410 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CTLA4P16410 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
CTLA4P16410 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CTLA4P16410 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTLA4P16410 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.71□□□□□ -0.37
CTLA4P16410 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
CTLA4P16410 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
CTLA4P16410 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.71□□□□□ -0.37
CTLA4P16410 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.71□□□□□ -0.37
CTLA4P16410 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CTLA4P16410 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CTLA4P16410 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.71□□□□□ -0.37
CTLA4P16410 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.71□□□□□ -0.37
CTLA4P16410 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.71□□□□□ -0.37
CTLA4P16410 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CTLA4P16410 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.71□□□□□ -0.37
CTLA4P16410 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.71□□□□□ -0.37
CTLA4P16410 GPR53P-205ENST00000457298 1084 ntBASIC12.71□□□□□ -0.37
CTLA4P16410 KRT18P15-201ENST00000458108 1291 ntBASIC12.71□□□□□ -0.37
CTLA4P16410 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.71□□□□□ -0.37
CTLA4P16410 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CTLA4P16410 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 AC005730.2-201ENST00000564549 1184 ntBASIC12.71□□□□□ -0.37
CTLA4P16410 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.71□□□□□ -0.37
CTLA4P16410 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.71□□□□□ -0.37
CTLA4P16410 AC133552.6-201ENST00000613406 534 ntBASIC12.71□□□□□ -0.37
CTLA4P16410 AC009542.2-202ENST00000619004 1067 ntBASIC12.71□□□□□ -0.37
CTLA4P16410 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.71□□□□□ -0.37
CTLA4P16410 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTLA4P16410 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.71□□□□□ -0.37
CTLA4P16410 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CTLA4P16410 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CTLA4P16410 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CTLA4P16410 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CTLA4P16410 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CTLA4P16410 AC007952.5-201ENST00000572818 1486 ntBASIC12.71□□□□□ -0.38
CTLA4P16410 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms