Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP1P11387 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP1P11387 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TOP1P11387 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TOP1P11387 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP1P11387 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.84■□□□□ 0.29
TOP1P11387 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TOP1P11387 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.84■□□□□ 0.29
TOP1P11387 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
TOP1P11387 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
TOP1P11387 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
TOP1P11387 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TOP1P11387 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TOP1P11387 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TOP1P11387 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TOP1P11387 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TOP1P11387 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TOP1P11387 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TOP1P11387 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
TOP1P11387 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TOP1P11387 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TOP1P11387 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
TOP1P11387 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.83■□□□□ 0.28
TOP1P11387 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.83■□□□□ 0.28
TOP1P11387 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.83■□□□□ 0.28
TOP1P11387 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.83■□□□□ 0.28
TOP1P11387 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.83■□□□□ 0.28
TOP1P11387 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TOP1P11387 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 AC134698.3-201ENST00000523880 214 ntBASIC16.83■□□□□ 0.28
TOP1P11387 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TOP1P11387 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TOP1P11387 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.83■□□□□ 0.28
TOP1P11387 KRT8P19-201ENST00000551916 1455 ntBASIC16.83■□□□□ 0.28
TOP1P11387 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.83■□□□□ 0.28
TOP1P11387 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.83■□□□□ 0.28
TOP1P11387 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TOP1P11387 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.83■□□□□ 0.28
TOP1P11387 AL109837.1-201ENST00000603272 613 ntBASIC16.83■□□□□ 0.28
TOP1P11387 LINC01783-202ENST00000614408 828 ntBASIC16.83■□□□□ 0.28
TOP1P11387 BX284668.2-205ENST00000619677 828 ntBASIC16.83■□□□□ 0.28
TOP1P11387 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.83■□□□□ 0.28
TOP1P11387 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.83■□□□□ 0.28
TOP1P11387 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TOP1P11387 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.83■□□□□ 0.28
TOP1P11387 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TOP1P11387 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.83■□□□□ 0.28
TOP1P11387 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TOP1P11387 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.83■□□□□ 0.28
TOP1P11387 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
TOP1P11387 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.82■□□□□ 0.28
TOP1P11387 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.82■□□□□ 0.28
TOP1P11387 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.82■□□□□ 0.28
TOP1P11387 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.82■□□□□ 0.28
TOP1P11387 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TOP1P11387 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.82■□□□□ 0.28
TOP1P11387 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.82■□□□□ 0.28
TOP1P11387 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms