Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MIR6787-201ENST00000616675 61 ntBASIC13.24□□□□□ -0.29
THBS1P07996 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
THBS1P07996 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THBS1P07996 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.24□□□□□ -0.29
THBS1P07996 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
THBS1P07996 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.23□□□□□ -0.29
THBS1P07996 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.23□□□□□ -0.29
THBS1P07996 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
THBS1P07996 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
THBS1P07996 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.23□□□□□ -0.29
THBS1P07996 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.23□□□□□ -0.29
THBS1P07996 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
THBS1P07996 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
THBS1P07996 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.23□□□□□ -0.29
THBS1P07996 YBX1P6-201ENST00000442962 1002 ntBASIC13.23□□□□□ -0.29
THBS1P07996 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.23□□□□□ -0.29
THBS1P07996 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.23□□□□□ -0.29
THBS1P07996 AL160314.3-201ENST00000556041 767 ntBASIC13.23□□□□□ -0.29
THBS1P07996 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC13.23□□□□□ -0.29
THBS1P07996 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.23□□□□□ -0.29
THBS1P07996 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.23□□□□□ -0.29
THBS1P07996 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.23□□□□□ -0.29
THBS1P07996 AC005962.1-201ENST00000584100 773 ntBASIC13.23□□□□□ -0.29
THBS1P07996 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.23□□□□□ -0.29
THBS1P07996 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.23□□□□□ -0.29
THBS1P07996 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 AP000346.4-201ENST00000614827 381 ntBASIC13.23□□□□□ -0.29
THBS1P07996 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
THBS1P07996 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.23□□□□□ -0.29
THBS1P07996 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.23□□□□□ -0.29
THBS1P07996 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.23□□□□□ -0.29
THBS1P07996 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.23□□□□□ -0.29
THBS1P07996 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
THBS1P07996 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.23□□□□□ -0.29
THBS1P07996 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
THBS1P07996 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
THBS1P07996 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.22□□□□□ -0.29
THBS1P07996 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.22□□□□□ -0.29
THBS1P07996 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 SHMT1P1-201ENST00000419974 1312 ntBASIC13.22□□□□□ -0.29
THBS1P07996 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.22□□□□□ -0.29
THBS1P07996 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.22□□□□□ -0.29
THBS1P07996 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 AC103592.1-201ENST00000394513 664 ntBASIC13.22□□□□□ -0.29
THBS1P07996 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 KRT18P36-201ENST00000411618 1276 ntBASIC13.22□□□□□ -0.29
THBS1P07996 HMGA1P1-201ENST00000415560 1062 ntBASIC13.22□□□□□ -0.29
THBS1P07996 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.22□□□□□ -0.29
THBS1P07996 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.22□□□□□ -0.29
THBS1P07996 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.22□□□□□ -0.29
THBS1P07996 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.22□□□□□ -0.29
THBS1P07996 TUBB8P8-201ENST00000458717 1058 ntBASIC13.22□□□□□ -0.29
THBS1P07996 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
THBS1P07996 PGAM1P5-201ENST00000548011 764 ntBASIC13.22□□□□□ -0.29
THBS1P07996 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.22□□□□□ -0.29
THBS1P07996 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 CYP4F23P-201ENST00000593402 1579 ntBASIC13.22□□□□□ -0.29
THBS1P07996 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms