Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.06■□□□□ 0
APOEP02649 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.06■□□□□ 0
APOEP02649 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.06■□□□□ 0
APOEP02649 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.06■□□□□ 0
APOEP02649 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
APOEP02649 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
APOEP02649 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.06■□□□□ 0
APOEP02649 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.06■□□□□ 0
APOEP02649 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 KRT18P36-201ENST00000411618 1276 ntBASIC15.06■□□□□ 0
APOEP02649 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.06■□□□□ 0
APOEP02649 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.06■□□□□ 0
APOEP02649 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.06■□□□□ 0
APOEP02649 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.06■□□□□ 0
APOEP02649 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.06■□□□□ 0
APOEP02649 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.06■□□□□ 0
APOEP02649 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.06■□□□□ 0
APOEP02649 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.06■□□□□ 0
APOEP02649 AL645939.5-201ENST00000606834 243 ntBASIC15.06■□□□□ 0
APOEP02649 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.06■□□□□ 0
APOEP02649 AC021016.3-201ENST00000608367 477 ntBASIC15.06■□□□□ 0
APOEP02649 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.06■□□□□ 0
APOEP02649 AC100757.4-201ENST00000626934 759 ntBASIC15.06■□□□□ 0
APOEP02649 NAP1L6-202ENST00000641404 1222 ntBASIC15.06■□□□□ 0
APOEP02649 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
APOEP02649 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
APOEP02649 AC064801.2-201ENST00000625052 1303 ntBASIC15.06■□□□□ 0
APOEP02649 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.06■□□□□ 0
APOEP02649 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.06■□□□□ 0
APOEP02649 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
APOEP02649 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
APOEP02649 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
APOEP02649 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
APOEP02649 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.06■□□□□ 0
APOEP02649 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.06■□□□□ 0
APOEP02649 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.06■□□□□ 0
APOEP02649 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
APOEP02649 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
APOEP02649 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.05■□□□□ 0
APOEP02649 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
APOEP02649 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
APOEP02649 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.05■□□□□ 0
APOEP02649 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
APOEP02649 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
APOEP02649 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
APOEP02649 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
APOEP02649 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.05■□□□□ -0
APOEP02649 CALR4P-201ENST00000431943 946 ntBASIC15.05■□□□□ -0
APOEP02649 AL161932.2-201ENST00000435436 679 ntBASIC15.05■□□□□ -0
APOEP02649 XBP1P1-201ENST00000436573 652 ntBASIC15.05■□□□□ -0
APOEP02649 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.05■□□□□ -0
APOEP02649 ST13P19-201ENST00000442505 1124 ntBASIC15.05■□□□□ -0
APOEP02649 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.05■□□□□ -0
APOEP02649 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.05■□□□□ -0
APOEP02649 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.05■□□□□ -0
APOEP02649 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.05■□□□□ -0
APOEP02649 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 PGAM1P5-201ENST00000548011 764 ntBASIC15.05■□□□□ -0
APOEP02649 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.05■□□□□ -0
APOEP02649 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.05■□□□□ -0
APOEP02649 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.05■□□□□ -0
APOEP02649 AC092299.1-201ENST00000632679 757 ntBASIC15.05■□□□□ -0
APOEP02649 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.05■□□□□ -0
APOEP02649 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 AC011498.7-201ENST00000624986 2027 ntBASIC15.05■□□□□ -0
APOEP02649 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
APOEP02649 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.05■□□□□ -0
APOEP02649 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.05■□□□□ -0
APOEP02649 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.05■□□□□ -0
APOEP02649 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.05■□□□□ -0
APOEP02649 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.05■□□□□ -0
APOEP02649 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APOEP02649 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
APOEP02649 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms