Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 SPDYE18-201ENST00000510091 1050 ntBASIC12.38□□□□□ -0.43
HLA-DQB1P01920 AC135586.1-201ENST00000539323 574 ntBASIC12.38□□□□□ -0.43
HLA-DQB1P01920 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 AC027237.1-201ENST00000560942 655 ntBASIC12.38□□□□□ -0.43
HLA-DQB1P01920 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 HSPA8P9-201ENST00000485881 1943 ntBASIC12.38□□□□□ -0.43
HLA-DQB1P01920 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 PCDHA5-203ENST00000614258 4248 ntBASIC12.38□□□□□ -0.43
HLA-DQB1P01920 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQB1P01920 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 LRRC59-203ENST00000576448 1531 ntBASIC12.37□□□□□ -0.43
HLA-DQB1P01920 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 MIR943-201ENST00000401286 94 ntBASIC12.37□□□□□ -0.43
HLA-DQB1P01920 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 ALG3P1-201ENST00000508806 1114 ntBASIC12.37□□□□□ -0.43
HLA-DQB1P01920 AP001582.1-201ENST00000525856 295 ntBASIC12.37□□□□□ -0.43
HLA-DQB1P01920 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 BRI3BPP1-201ENST00000594224 787 ntBASIC12.37□□□□□ -0.43
HLA-DQB1P01920 LINC02084-201ENST00000606069 1096 ntBASIC12.37□□□□□ -0.43
HLA-DQB1P01920 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQB1P01920 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms