Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GPC4O75487 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GPC4O75487 AC004899.2-201ENST00000622993 3860 ntBASIC14.47□□□□□ -0.09
GPC4O75487 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
GPC4O75487 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
GPC4O75487 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.47□□□□□ -0.09
GPC4O75487 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 REXO1L1P-201ENST00000379010 6598 ntBASIC14.46□□□□□ -0.09
GPC4O75487 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.46□□□□□ -0.09
GPC4O75487 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.46□□□□□ -0.09
GPC4O75487 AC020910.6-201ENST00000623084 1459 ntBASIC14.46□□□□□ -0.09
GPC4O75487 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 AC130686.1-201ENST00000622936 2466 ntBASIC14.46□□□□□ -0.09
GPC4O75487 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.46□□□□□ -0.09
GPC4O75487 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.46□□□□□ -0.09
GPC4O75487 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
GPC4O75487 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 CICP12-201ENST00000455801 843 ntBASIC14.46□□□□□ -0.09
GPC4O75487 AC100850.1-201ENST00000506768 649 ntBASIC14.46□□□□□ -0.09
GPC4O75487 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.46□□□□□ -0.09
GPC4O75487 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.46□□□□□ -0.09
GPC4O75487 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.46□□□□□ -0.09
GPC4O75487 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.46□□□□□ -0.09
GPC4O75487 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.46□□□□□ -0.09
GPC4O75487 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.46□□□□□ -0.09
GPC4O75487 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.46□□□□□ -0.09
GPC4O75487 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.46□□□□□ -0.09
GPC4O75487 AC027601.3-201ENST00000622907 509 ntBASIC14.46□□□□□ -0.09
GPC4O75487 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.46□□□□□ -0.09
GPC4O75487 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
GPC4O75487 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.46□□□□□ -0.09
GPC4O75487 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GPC4O75487 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.46□□□□□ -0.1
GPC4O75487 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.46□□□□□ -0.1
GPC4O75487 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
GPC4O75487 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
GPC4O75487 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.46□□□□□ -0.1
GPC4O75487 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
GPC4O75487 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.46□□□□□ -0.1
GPC4O75487 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GPC4O75487 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GPC4O75487 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
GPC4O75487 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GPC4O75487 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GPC4O75487 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
GPC4O75487 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
GPC4O75487 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.45□□□□□ -0.1
GPC4O75487 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.45□□□□□ -0.1
GPC4O75487 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 RN7SL832P-201ENST00000607781 1756 ntBASIC14.45□□□□□ -0.1
GPC4O75487 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.45□□□□□ -0.1
GPC4O75487 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 AC079178.1-201ENST00000420915 656 ntBASIC14.45□□□□□ -0.1
GPC4O75487 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 AL035414.1-201ENST00000451327 857 ntBASIC14.45□□□□□ -0.1
GPC4O75487 BNIP3P42-201ENST00000454982 569 ntBASIC14.45□□□□□ -0.1
GPC4O75487 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.45□□□□□ -0.1
GPC4O75487 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC4O75487 BNIP3P29-201ENST00000598302 571 ntBASIC14.45□□□□□ -0.1
GPC4O75487 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC4O75487 MIR6074-201ENST00000612054 107 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms