Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
BIVM-ERCC5R4GMW8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC38.28■■■■□ 3.72
BIVM-ERCC5R4GMW8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC38.27■■■■□ 3.72
BIVM-ERCC5R4GMW8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC38.27■■■■□ 3.72
BIVM-ERCC5R4GMW8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC38.27■■■■□ 3.72
BIVM-ERCC5R4GMW8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC38.27■■■■□ 3.72
BIVM-ERCC5R4GMW8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
BIVM-ERCC5R4GMW8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC38.27■■■■□ 3.72
BIVM-ERCC5R4GMW8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC38.27■■■■□ 3.72
BIVM-ERCC5R4GMW8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC38.26■■■■□ 3.71
BIVM-ERCC5R4GMW8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC38.26■■■■□ 3.71
BIVM-ERCC5R4GMW8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.71
BIVM-ERCC5R4GMW8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
BIVM-ERCC5R4GMW8 AC141586.4-201ENST00000624558 1573 ntBASIC38.25■■■■□ 3.71
BIVM-ERCC5R4GMW8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC38.25■■■■□ 3.71
BIVM-ERCC5R4GMW8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC38.25■■■■□ 3.71
BIVM-ERCC5R4GMW8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
BIVM-ERCC5R4GMW8 AC090192.1-201ENST00000517740 490 ntBASIC38.23■■■■□ 3.71
BIVM-ERCC5R4GMW8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
BIVM-ERCC5R4GMW8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC38.23■■■■□ 3.71
BIVM-ERCC5R4GMW8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC38.23■■■■□ 3.71
BIVM-ERCC5R4GMW8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
BIVM-ERCC5R4GMW8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
BIVM-ERCC5R4GMW8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
BIVM-ERCC5R4GMW8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC38.23■■■■□ 3.71
BIVM-ERCC5R4GMW8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC38.23■■■■□ 3.71
BIVM-ERCC5R4GMW8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC38.23■■■■□ 3.71
BIVM-ERCC5R4GMW8 AC126544.1-201ENST00000580842 1059 ntBASIC38.23■■■■□ 3.71
BIVM-ERCC5R4GMW8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
BIVM-ERCC5R4GMW8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC38.22■■■■□ 3.71
BIVM-ERCC5R4GMW8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
BIVM-ERCC5R4GMW8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
BIVM-ERCC5R4GMW8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC38.21■■■■□ 3.71
BIVM-ERCC5R4GMW8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC38.21■■■■□ 3.71
BIVM-ERCC5R4GMW8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC38.2■■■■□ 3.71
BIVM-ERCC5R4GMW8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC38.2■■■■□ 3.71
BIVM-ERCC5R4GMW8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC38.2■■■■□ 3.71
BIVM-ERCC5R4GMW8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC38.2■■■■□ 3.71
BIVM-ERCC5R4GMW8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
BIVM-ERCC5R4GMW8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC38.2■■■■□ 3.71
BIVM-ERCC5R4GMW8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC38.2■■■■□ 3.71
BIVM-ERCC5R4GMW8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC38.2■■■■□ 3.7
BIVM-ERCC5R4GMW8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.7
BIVM-ERCC5R4GMW8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.7
BIVM-ERCC5R4GMW8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC38.2■■■■□ 3.7
BIVM-ERCC5R4GMW8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC38.2■■■■□ 3.7
BIVM-ERCC5R4GMW8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC38.19■■■■□ 3.7
BIVM-ERCC5R4GMW8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC38.19■■■■□ 3.7
BIVM-ERCC5R4GMW8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC38.19■■■■□ 3.7
BIVM-ERCC5R4GMW8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
BIVM-ERCC5R4GMW8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
BIVM-ERCC5R4GMW8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
BIVM-ERCC5R4GMW8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC38.18■■■■□ 3.7
BIVM-ERCC5R4GMW8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
BIVM-ERCC5R4GMW8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC38.18■■■■□ 3.7
BIVM-ERCC5R4GMW8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC38.18■■■■□ 3.7
BIVM-ERCC5R4GMW8 OR2I1P-207ENST00000453522 948 ntBASIC38.18■■■■□ 3.7
BIVM-ERCC5R4GMW8 RARRES2P11-201ENST00000635158 484 ntBASIC38.18■■■■□ 3.7
BIVM-ERCC5R4GMW8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC38.18■■■■□ 3.7
BIVM-ERCC5R4GMW8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
BIVM-ERCC5R4GMW8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC38.17■■■■□ 3.7
BIVM-ERCC5R4GMW8 MIR572-201ENST00000384983 95 ntBASIC38.17■■■■□ 3.7
BIVM-ERCC5R4GMW8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC38.17■■■■□ 3.7
BIVM-ERCC5R4GMW8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
BIVM-ERCC5R4GMW8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC38.16■■■■□ 3.7
BIVM-ERCC5R4GMW8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC38.16■■■■□ 3.7
BIVM-ERCC5R4GMW8 AL358852.1-201ENST00000623174 1268 ntBASIC38.16■■■■□ 3.7
BIVM-ERCC5R4GMW8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC38.16■■■■□ 3.7
BIVM-ERCC5R4GMW8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC38.16■■■■□ 3.7
BIVM-ERCC5R4GMW8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC38.16■■■■□ 3.7
BIVM-ERCC5R4GMW8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC38.16■■■■□ 3.7
BIVM-ERCC5R4GMW8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC38.16■■■■□ 3.7
BIVM-ERCC5R4GMW8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC38.16■■■■□ 3.7
BIVM-ERCC5R4GMW8 AL499627.2-201ENST00000606283 725 ntBASIC38.16■■■■□ 3.7
BIVM-ERCC5R4GMW8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
BIVM-ERCC5R4GMW8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC38.15■■■■□ 3.7
BIVM-ERCC5R4GMW8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC38.15■■■■□ 3.7
BIVM-ERCC5R4GMW8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC38.15■■■■□ 3.7
BIVM-ERCC5R4GMW8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC38.15■■■■□ 3.7
BIVM-ERCC5R4GMW8 AC123595.1-201ENST00000440769 1046 ntBASIC38.15■■■■□ 3.7
BIVM-ERCC5R4GMW8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
BIVM-ERCC5R4GMW8 AC010525.1-201ENST00000585559 441 ntBASIC38.14■■■■□ 3.7
BIVM-ERCC5R4GMW8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
BIVM-ERCC5R4GMW8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
BIVM-ERCC5R4GMW8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC38.14■■■■□ 3.7
BIVM-ERCC5R4GMW8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC38.14■■■■□ 3.7
BIVM-ERCC5R4GMW8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
BIVM-ERCC5R4GMW8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
BIVM-ERCC5R4GMW8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC38.13■■■■□ 3.69
BIVM-ERCC5R4GMW8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC38.13■■■■□ 3.69
BIVM-ERCC5R4GMW8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
BIVM-ERCC5R4GMW8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
BIVM-ERCC5R4GMW8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
BIVM-ERCC5R4GMW8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC38.12■■■■□ 3.69
BIVM-ERCC5R4GMW8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC38.12■■■■□ 3.69
BIVM-ERCC5R4GMW8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC38.12■■■■□ 3.69
BIVM-ERCC5R4GMW8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC38.12■■■■□ 3.69
BIVM-ERCC5R4GMW8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
BIVM-ERCC5R4GMW8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
BIVM-ERCC5R4GMW8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms